myRT

myRT report for GCA_000776395.1_ASM77639v1

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Seq: JSFS01000091.1 (4701 bp)
Overview 1 RT 1: 3-4639 bp Neighborhood of RT #1 [3, 4641] PRK13732 RVT-GII Intron_maturas2 HNHc Antirestrict Feature: gene Location: 3-209 bp Feature: domain Description: PRK13732 Location: 9-210 bp Feature: domain Description: PRK1 3732 Location: 9-21 0 bp Feature: gene Location: 404-2305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 671-1502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 671 -1 502 bp Feature: domain Description: Intron_maturas2 Location: 1616-1874 bp Feature: domain Description: Intron_maturas2 Location: 1 61 6-1 874 bp Feature: domain Description: HNHc Note: nucleases Location: 2048-2210 bp Feature: domain Description: HNHc Note: nucleases Location: 2048-221 0 bp Feature: gene Location: 2868-3410 bp Feature: gene Location: 4216-4641 bp Feature: domain Description: Antirestrict Location: 4351-4639 bp Feature: domain Description: Antirestrict Location: 4351 -4639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Antirestrict (pfam03230)

Seq: JSFS01000070.1 (5316 bp)
Overview 1 RT 1: 1859-4608 bp Neighborhood of RT #1 [1859, 4703] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1859-2092 bp Feature: domain Description: DUF905 Location: 1889-2087 bp Feature: domain Description: DUF905 Location: 1889-2 087 bp Feature: gene Location: 2155-2607 bp Feature: domain Description: PRK13732 Location: 2161-2605 bp Feature: domain Description: PRK13732 Location: 2 161-2 605 bp Feature: gene Location: 2802-4703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3069-3900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3069-3900 bp Feature: domain Description: Intron_maturas2 Location: 4014-4272 bp Feature: domain Description: Intron_maturas2 Location: 4014-42 72 bp Feature: domain Description: HNHc Note: nucleases Location: 4446-4608 bp Feature: domain Description: HNHc Note: nucleases Location: 4446-4608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JSFS01000066.1 (3936 bp)
Overview 1 RT 1: 270-3436 bp Neighborhood of RT #1 [270, 3441] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 270-479 bp Feature: gene Location: 614-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1712 bp Feature: domain Description: Intron_maturas2 Location: 1826-2084 bp Feature: domain Description: Intron_maturas2 Location: 1826-2084 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2420 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2420 bp Feature: gene Location: 2710-3150 bp Feature: domain Description: PRK13732 Location: 2716-3148 bp Feature: domain Description: PRK13 73 2 Location: 2716-3 148 bp Feature: gene Location: 3208-3441 bp Feature: domain Description: DUF905 Location: 3238-3436 bp Feature: domain Description: DUF905 Location: 3 23 8-3 43 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JSFS01000090.1 (282228 bp)
Overview 1 RT 1: 270652-275698 bp Neighborhood of RT #1 [270652, 275709] prfC DinI RVT-Retrons TIR_2 Caudo_TAP Feature: gene Location: 270652-272238 bp Feature: domain Description: prfC Location: 270670-272236 bp Feature: domain Description: prfC Location: 270670-272236 bp Feature: gene Location: 272519-272719 bp Feature: domain Description: DinI Location: 272528-272699 bp Feature: domain Description: DinI Location: 272528-272699 bp Feature: gene Location: 273077-273805 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 273368-273776 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 273368-273776 bp Feature: gene Location: 274027-274680 bp Feature: domain Description: TIR_2 Location: 274285-274576 bp Feature: domain Description: TIR_2 Location: 274 285-274 576 bp Feature: gene Location: 275125-275709 bp Feature: domain Description: Caudo_TAP Location: 275341-275698 bp Feature: domain Description: Caudo_TAP Location: 27534 1-275698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), DinI (pfam06183), RVT-Retrons, TIR_2 (pfam13676), Caudo_TAP (pfam02413)

Seq: JSFS01000022.1 (50139 bp)
Overview 1 RT 1: 8071-12012 bp Neighborhood of RT #1 [8071, 12012] RVT-Retrons Feature: gene Location: 8071-9210 bp Feature: gene Location: 9256-9423 bp Feature: gene Location: 9445-11217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9604-10222 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9604-10222 bp Feature: gene Location: 11438-11581 bp Feature: gene Location: 11773-12012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons