myRT

myRT report for GCA_000776505.1_ASM77650v1

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Seq: JSHD01000070.1 (55317 bp)
Overview 1 RT 1: 3-1829 bp Neighborhood of RT #1 [3, 1837] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-257 bp Feature: gene Location: 551-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-893 bp Feature: gene Location: 1093-1404 bp Feature: domain Description: PRK10173 Location: 1096-1315 bp Feature: domain Description: PRK1 01 73 Location: 1 096-1 31 5 bp Feature: gene Location: 1388-1837 bp Feature: domain Description: PRK10173 Location: 1391-1829 bp Feature: domain Description: PRK1 01 73 Location: 1 391 -1 829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: JSHD01000010.1 (4853 bp)
Overview 1 RT 1: 3-2942 bp Neighborhood of RT #1 [3, 2980] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3-257 bp Feature: gene Location: 551-2074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 4-1556 bp Feature: domain Description: GIIM Note: maturase Location: 1631-1829 bp Feature: domain Description: GIIM Note: maturase Location: 1631-182 9 bp Feature: gene Location: 2251-2547 bp Feature: domain Description: PHA02517 Location: 2254-2503 bp Feature: domain Description: PHA02 517 Location: 2 2 54-2 503 bp Feature: gene Location: 2576-2980 bp Feature: domain Description: InsE Location: 2606-2942 bp Feature: domain Description: InsE Location: 2 606-2 942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JSHD01000071.1 (102450 bp)
Overview 1 RT 1: 2-3620 bp Neighborhood of RT #1 [2, 3620] PRK09183 RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 2-748 bp Feature: domain Description: PRK09183 Location: 5-746 bp Feature: domain Description: PRK09183 Location: 5-746 bp Feature: gene Location: 787-2157 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1048-1504 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1048-1504 bp Feature: gene Location: 2259-3296 bp Feature: domain Description: HTH_29 Location: 2355-2526 bp Feature: domain Description: HTH_29 Location: 23 55-2526 bp Feature: domain Description: HTH_33 Location: 2559-2721 bp Feature: domain Description: HTH_3 3 Location: 2559-2721 bp Feature: domain Description: DDE_3 Location: 2763-3192 bp Feature: domain Description: DDE_3 Location: 2763 -3 192 bp Feature: gene Location: 3330-3620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09183 (transposase/IS protein; Provisional), RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)