myRT

myRT report for GCA_000776615.1_ASM77661v1

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Seq: JSGZ01000089.1 (6268 bp)
Overview 1 RT 1: 2-3302 bp Neighborhood of RT #1 [2, 3331] RVT-GII GIIM InsE TnpB_IS66 Feature: gene Location: 2-265 bp Feature: gene Location: 559-2082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832-1564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832-1 564 bp Feature: domain Description: GIIM Note: maturase Location: 1639-1837 bp Feature: domain Description: GIIM Note: maturase Location: 1 639-1 837 bp Feature: gene Location: 2583-2987 bp Feature: domain Description: InsE Location: 2613-2949 bp Feature: domain Description: InsE Location: 261 3-2949 bp Feature: gene Location: 3038-3331 bp Feature: domain Description: TnpB_IS66 Location: 3041-3302 bp Feature: domain Description: TnpB_IS66 Location: 3041 -3302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388)

Seq: JSGZ01000094.1 (132252 bp)
Overview 1 RT 1: 85295-88722 bp Neighborhood of RT #1 [85295, 88722] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 85295-85510 bp Feature: gene Location: 85601-85882 bp Feature: domain Description: HTH_XRE Location: 85616-85781 bp Feature: domain Description: HTH_XRE Location: 85616-85781 bp Feature: gene Location: 86094-86975 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86100-86568 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86100-86568 bp Feature: gene Location: 87047-88552 bp Feature: domain Description: PRK13889 Location: 87050-87650 bp Feature: domain Description: PRK13889 Location: 87050-87650 bp Feature: gene Location: 88585-88722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: JSGZ01000021.1 (55019 bp)
Overview 1 RT 1: 53175-55018 bp Neighborhood of RT #1 [53175, 55018] PRK10173 PRK10173 RVT-GII Feature: gene Location: 53175-53624 bp Feature: domain Description: PRK10173 Location: 53178-53616 bp Feature: domain Description: PRK10173 Location: 53 178-53 616 bp Feature: gene Location: 53608-53919 bp Feature: domain Description: PRK10173 Location: 53611-53830 bp Feature: domain Description: PRK10173 Location: 53 611-53 83 0 bp Feature: gene Location: 53958-54461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54231-54303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5423 1-543 03 bp Feature: gene Location: 54755-55018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: JSGZ01000068.1 (14292 bp)
Overview 1 RT 1: 12567-14291 bp Neighborhood of RT #1 [12567, 14290] InsE PHA02517 RVT-GII Feature: gene Location: 12567-12893 bp Feature: domain Description: InsE Location: 12570-12891 bp Feature: domain Description: InsE Location: 12570-12891 bp Feature: gene Location: 12893-13372 bp Feature: domain Description: PHA02517 Location: 12953-13307 bp Feature: domain Description: PHA02517 Location: 12953-13307 bp Feature: gene Location: 13964-14290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14237-14291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 237-14 291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII