myRT

myRT report for GCA_000776695.1_ASM77669v1

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Seq: JSFV01000049.1 (2675 bp)
Overview 1 RT 1: 2-2608 bp Neighborhood of RT #1 [2, 2673] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2-253 bp Feature: domain Description: PHA02517 Location: 5-254 bp Feature: domain Description: PHA0251 7 Location: 5-254 bp Feature: gene Location: 370-1893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643-1375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643-1 375 bp Feature: domain Description: GIIM Note: maturase Location: 1450-1648 bp Feature: domain Description: GIIM Note: maturase Location: 1 450-1 648 bp Feature: gene Location: 2485-2673 bp Feature: domain Description: PHA02517 Location: 2488-2608 bp Feature: domain Description: PHA0251 7 Location: 2488-2608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JSFV01000037.1 (1537 bp)
Overview 1 RT 1: 3-1335 bp Neighborhood of RT #1 [3, 1400] RVT-GII PHA02517 Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76-330 bp Feature: gene Location: 921-1400 bp Feature: domain Description: PHA02517 Location: 981-1335 bp Feature: domain Description: PHA02 517 Location: 981-1335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: JSFV01000038.1 (3454 bp)
Overview 1 RT 1: 1386-3387 bp Neighborhood of RT #1 [1386, 3452] PRK10173 PRK10173 RVT-GII PHA02517 Feature: gene Location: 1386-1835 bp Feature: domain Description: PRK10173 Location: 1389-1827 bp Feature: domain Description: PRK10173 Location: 13 89-1827 bp Feature: gene Location: 1819-2130 bp Feature: domain Description: PRK10173 Location: 1822-2041 bp Feature: domain Description: PRK10173 Location: 1822-2041 bp Feature: gene Location: 2169-2672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2442-2514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2442-2514 bp Feature: gene Location: 3264-3452 bp Feature: domain Description: PHA02517 Location: 3267-3387 bp Feature: domain Description: PHA02517 Location: 3 267-3 3 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: JSFV01000203.1 (67477 bp)
Overview 1 RT 1: 22114-26230 bp Neighborhood of RT #1 [22114, 26931] PRK09692 RVT-Retrons ABC_ATPase Relaxase Feature: gene Location: 22114-22452 bp Feature: domain Description: PRK09692 Location: 22123-22444 bp Feature: domain Description: PRK09692 Location: 22123-224 4 4 bp Feature: gene Location: 22516-22722 bp Feature: gene Location: 23055-24005 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23202-23730 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23202-23730 bp Feature: gene Location: 24002-25366 bp Feature: domain Description: ABC_ATPase Location: 24050-24758 bp Feature: domain Description: ABC_ATPase Location: 24 050-24 758 bp Feature: gene Location: 25471-26931 bp Feature: domain Description: Relaxase Location: 25498-26230 bp Feature: domain Description: Relaxase Location: 254 98-26230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, ABC_ATPase (pfam09818), Relaxase (pfam03432)