myRT

myRT report for GCA_000776775.1_ASM77677v1

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Seq: JSHH01000011.1 (1937 bp)
Overview 1 RT 1: 83-1751 bp Neighborhood of RT #1 [83, 1837] RVT-GII GIIM Feature: gene Location: 83-223 bp Feature: gene Location: 587-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791-1448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791 -1 448 bp Feature: domain Description: GIIM Note: maturase Location: 1529-1751 bp Feature: domain Description: GIIM Note: maturase Location: 1 529-1 751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JSHH01000099.1 (263915 bp)
Overview 1 RT 1: 152-2517 bp Neighborhood of RT #1 [152, 2522] RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 152-1522 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 380-986 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 380-986 bp Feature: gene Location: 1500-2051 bp Feature: domain Description: SLATT_5 Location: 1506-2022 bp Feature: domain Description: SLATT_5 Location: 1506-2 02 2 bp Feature: gene Location: 2274-2522 bp Feature: domain Description: PRK10597 Location: 2277-2517 bp Feature: domain Description: PRK10597 Location: 2 2 77-2 517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: JSHH01000043.1 (3221 bp)
Overview 1 RT 1: 3-2942 bp Neighborhood of RT #1 [3, 2980] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3-257 bp Feature: gene Location: 551-2074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-1556 bp Feature: domain Description: GIIM Note: maturase Location: 1631-1829 bp Feature: domain Description: GIIM Note: maturase Location: 163 1-1829 bp Feature: gene Location: 2251-2547 bp Feature: domain Description: PHA02517 Location: 2254-2503 bp Feature: domain Description: PHA02517 Location: 2254-2503 bp Feature: gene Location: 2576-2980 bp Feature: domain Description: InsE Location: 2606-2942 bp Feature: domain Description: InsE Location: 2606-2942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JSHH01000063.1 (1537 bp)
Overview 1 RT 1: 138-1536 bp Neighborhood of RT #1 [138, 1535] PHA02517 RVT-GII Feature: gene Location: 138-617 bp Feature: domain Description: PHA02517 Location: 198-552 bp Feature: domain Description: PHA02517 Location: 198-552 bp Feature: gene Location: 1209-1535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1482-1536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 82-1536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: JSHH01000095.1 (358635 bp)
Overview 1 RT 1: 335033-341485 bp Neighborhood of RT #1 [335033, 341485] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 335033-335284 bp Feature: gene Location: 335314-336150 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 335803-335974 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 335 803-335 974 bp Feature: gene Location: 336806-337906 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 336986-337520 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 336986-3375 20 bp Feature: gene Location: 338021-340297 bp Feature: domain Description: AAA_15 Location: 338054-339062 bp Feature: domain Description: AAA_15 Location: 33805 4-339062 bp Feature: gene Location: 341180-341485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)