myRT

myRT report for GCA_000776855.1_ASM77685v1

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Seq: JSFX01000055.1 (5192 bp)
Overview 1 RT 1: 1-3604 bp Neighborhood of RT #1 [1, 3636] umuC PRK10276 RVT-GII group_II_RT_mat StbA Feature: gene Location: 1-342 bp Feature: domain Description: umuC Location: 4-343 bp Feature: domain Description: umuC Location: 4-343 bp Feature: gene Location: 342-1016 bp Feature: domain Description: PRK10276 Location: 594-1002 bp Feature: domain Description: PRK1 0276 Location: 594-1 002 bp Feature: gene Location: 1170-2303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1575-2187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 575-21 87 bp Feature: gene Location: 2327-2656 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2333-2522 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2333-2522 bp Feature: gene Location: 2905-3636 bp Feature: domain Description: StbA Location: 2908-3604 bp Feature: domain Description: StbA Location: 2908-3604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, group_II_RT_mat (TIGR04416), StbA (pfam06406)

Seq: JSFX01000030.1 (382626 bp)
Overview 1 RT 1: 99002-106077 bp Neighborhood of RT #1 [99002, 106077] HTH_29 HTH_33 DDE_3 RVT-AbiP2 Feature: gene Location: 99002-99292 bp Feature: gene Location: 99302-100363 bp Feature: domain Description: HTH_29 Location: 99422-99593 bp Feature: domain Description: HTH_2 9 Location: 9942 2 -99593 bp Feature: domain Description: HTH_33 Location: 99626-99788 bp Feature: domain Description: HTH_33 Location: 9962 6-99788 bp Feature: domain Description: DDE_3 Location: 99830-100259 bp Feature: domain Description: DDE_3 Location: 99830-1002 59 bp Feature: gene Location: 100465-102003 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100894-101350 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100894-101350 bp Feature: gene Location: 102060-102191 bp Feature: gene Location: 102226-106077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2