myRT

myRT report for GCA_000776925.1_ASM77692v1

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Seq: JSHJ01000050.1 (24465 bp)
Overview 1 RT 1: 6464-10755 bp Neighborhood of RT #1 [6464, 10755] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 6464-7726 bp Feature: domain Description: YesM Location: 6977-7718 bp Feature: domain Description: YesM Location: 6977-771 8 bp Feature: gene Location: 7756-7926 bp Feature: gene Location: 8276-8797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8282-8564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8282-8564 bp Feature: domain Description: GIIM Note: maturase Location: 8612-8792 bp Feature: domain Description: GIIM Note: maturase Location: 861 2-8792 bp Feature: gene Location: 8825-9364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9155-9233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 55-9233 bp Feature: gene Location: 9395-9592 bp Feature: gene Location: 9850-10755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JSHJ01000115.1 (13047 bp)
Overview 1 RT 1: 8199-11627 bp Neighborhood of RT #1 [8199, 11627] PinE RVT-GII GIIM Feature: gene Location: 8199-8846 bp Feature: domain Description: PinE Location: 8292-8841 bp Feature: domain Description: PinE Location: 82 92 -8841 bp Feature: gene Location: 8946-9347 bp Feature: gene Location: 9641-10906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9962-10580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9962 -10580 bp Feature: domain Description: GIIM Note: maturase Location: 10628-10808 bp Feature: domain Description: GIIM Note: maturase Location: 1062 8-10808 bp Feature: gene Location: 10977-11327 bp Feature: gene Location: 11490-11627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388)

Seq: JSHJ01000067.1 (4521 bp)
Overview 1 RT 1: 1-3411 bp Neighborhood of RT #1 [1, 3425] InsG RVT-GII GIIM GrsT DUF1706 Feature: gene Location: 1-645 bp Feature: domain Description: InsG Location: 4-637 bp Feature: domain Description: InsG Location: 4-63 7 bp Feature: gene Location: 738-2084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834-1566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 4-1566 bp Feature: domain Description: GIIM Note: maturase Location: 1641-1839 bp Feature: domain Description: GIIM Note: maturase Location: 1641-183 9 bp Feature: gene Location: 2597-2878 bp Feature: domain Description: GrsT Location: 2600-2858 bp Feature: domain Description: GrsT Location: 2600-2858 bp Feature: gene Location: 2913-3425 bp Feature: domain Description: DUF1706 Location: 2916-3411 bp Feature: domain Description: DUF1706 Location: 2916-3 411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsG (COG3385), RVT-GII, GIIM (pfam08388), GrsT (COG3208), DUF1706 (pfam08020)

Seq: JSHJ01000116.1 (260785 bp)
Overview 1 RT 1: 65442-69383 bp Neighborhood of RT #1 [65442, 69383] RVT-Retrons Feature: gene Location: 65442-66581 bp Feature: gene Location: 66627-66794 bp Feature: gene Location: 66816-68588 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66975-67593 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66975-67593 bp Feature: gene Location: 68809-68952 bp Feature: gene Location: 69144-69383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons