myRT

myRT report for GCA_000776965.1_ASM77696v1

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Seq: JSHL01000082.1 (9924 bp)
Overview 1 RT 1: 2753-7250 bp Neighborhood of RT #1 [2753, 7561] RVT-GII GIIM PHA02517 AAA_15 TOPRIM_OLD Feature: gene Location: 2753-2914 bp Feature: gene Location: 3191-3562 bp Feature: gene Location: 3856-5379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4129-4861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 29-4861 bp Feature: domain Description: GIIM Note: maturase Location: 4936-5134 bp Feature: domain Description: GIIM Note: maturase Location: 4936-51 34 bp Feature: gene Location: 5496-5942 bp Feature: domain Description: PHA02517 Location: 5499-5940 bp Feature: domain Description: PHA0251 7 Location: 5499-5940 bp Feature: gene Location: 6113-7561 bp Feature: domain Description: AAA_15 Location: 6698-6833 bp Feature: domain Description: AAA_1 5 Location: 6698-6833 bp Feature: domain Description: TOPRIM_OLD Location: 6998-7250 bp Feature: domain Description: TOPRIM_OLD Location: 6998-7250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), AAA_15 (pfam13175), TOPRIM_OLD (cd01026)

Seq: JSHL01000062.1 (43969 bp)
Overview 1 RT 1: 5896-10187 bp Neighborhood of RT #1 [5896, 10187] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5896-7158 bp Feature: domain Description: YesM Location: 6409-7150 bp Feature: domain Description: YesM Location: 6409-7150 bp Feature: gene Location: 7188-7358 bp Feature: gene Location: 7708-8229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7714-7996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7714-7996 bp Feature: domain Description: GIIM Note: maturase Location: 8044-8224 bp Feature: domain Description: GIIM Note: maturase Location: 8044-82 2 4 bp Feature: gene Location: 8257-8796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8587-8665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8587-8665 bp Feature: gene Location: 8827-9024 bp Feature: gene Location: 9282-10187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)