myRT

myRT report for GCA_000777675.1_ASM77767v1

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Seq: JSIU01000101.1 (78376 bp)
Overview 1 RT 1: 829-4299 bp Neighborhood of RT #1 [829, 4406] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 829-1131 bp Feature: domain Description: Arm-DNA-bind_3 Location: 838-1090 bp Feature: domain Description: Arm-DNA-bind_3 Location: 838-1 090 bp Feature: gene Location: 1315-1560 bp Feature: gene Location: 1586-2518 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1688-2282 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 688-2282 bp Feature: gene Location: 2520-3506 bp Feature: gene Location: 4134-4406 bp Feature: domain Description: PRK09678 Location: 4143-4299 bp Feature: domain Description: PRK09678 Location: 41 43-4299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), Arm-DNA-bind_3 (pfam13356)

Seq: JSIU01000057.1 (11604 bp)
Overview 1 RT 1: 8517-11601 bp Neighborhood of RT #1 [8517, 11601] COG2085 PHA02517 RVT-GII GIIM Feature: gene Location: 8517-8930 bp Feature: domain Description: COG2085 Location: 8616-8763 bp Feature: domain Description: COG2 085 Location: 8616-8763 bp Feature: gene Location: 9096-9272 bp Feature: domain Description: PHA02517 Location: 9099-9201 bp Feature: domain Description: PHA02 517 Location: 9099-92 01 bp Feature: gene Location: 9425-10948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9698-10430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9698-10430 bp Feature: domain Description: GIIM Note: maturase Location: 10505-10703 bp Feature: domain Description: GIIM Note: maturase Location: 10505-10703 bp Feature: gene Location: 11242-11601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JSIU01000027.1 (13357 bp)
Overview 1 RT 1: 93-2568 bp Neighborhood of RT #1 [93, 2633] RVT-GII GIIM PHA02517 Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1570-1995 bp Feature: gene Location: 2208-2633 bp Feature: domain Description: PHA02517 Location: 2232-2568 bp Feature: domain Description: PHA02517 Location: 223 2-2568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)