myRT

myRT report for GCA_000777995.1_ASM77799v1

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Seq: JSJL01000027.1 (2249 bp)
Overview 1 RT 1: 107-2118 bp Neighborhood of RT #1 [107, 2132] RVT-GII GIIM YhhI Feature: gene Location: 107-247 bp Feature: gene Location: 611-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 815-1472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 5-1 472 bp Feature: domain Description: GIIM Note: maturase Location: 1553-1775 bp Feature: domain Description: GIIM Note: maturase Location: 1 553-1 775 bp Feature: gene Location: 1872-2132 bp Feature: domain Description: YhhI Location: 1947-2118 bp Feature: domain Description: YhhI Location: 1 947-21 1 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: JSJL01000122.1 (517651 bp)
Overview 1 RT 1: 206416-212868 bp Neighborhood of RT #1 [206416, 212868] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 206416-206721 bp Feature: gene Location: 207604-209880 bp Feature: domain Description: AAA_15 Location: 207637-208645 bp Feature: domain Description: AAA_15 Location: 2 07637-2 08645 bp Feature: gene Location: 209995-211095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 210178-210706 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 10178-2 10706 bp Feature: gene Location: 211751-212587 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 212240-212411 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 12 2 40-2 12 411 bp Feature: gene Location: 212617-212868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: JSJL01000016.1 (4155 bp)
Overview 1 RT 1: 518-3953 bp Neighborhood of RT #1 [518, 4018] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 518-922 bp Feature: domain Description: InsE Location: 548-884 bp Feature: domain Description: InsE Location: 548-884 bp Feature: gene Location: 951-1307 bp Feature: domain Description: PHA02517 Location: 954-1263 bp Feature: domain Description: PHA02517 Location: 954-1263 bp Feature: gene Location: 1424-2947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1697-2429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1697-2429 bp Feature: domain Description: GIIM Note: maturase Location: 2504-2702 bp Feature: domain Description: GIIM Note: maturase Location: 2504-2702 bp Feature: gene Location: 2901-3326 bp Feature: gene Location: 3539-4018 bp Feature: domain Description: PHA02517 Location: 3599-3953 bp Feature: domain Description: PHA02517 Location: 3 599-3 953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)