myRT

myRT report for GCA_000778395.1_ASM77839v1

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Seq: JSKF01000059.1 (8682 bp)
Overview 1 RT 1: 77-2408 bp Neighborhood of RT #1 [77, 2416] RVT-GII GIIM YesM Feature: gene Location: 77-604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83-371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83-371 bp Feature: domain Description: GIIM Note: maturase Location: 419-599 bp Feature: domain Description: GIIM Note: maturase Location: 41 9-599 bp Feature: gene Location: 926-1114 bp Feature: gene Location: 1154-2416 bp Feature: domain Description: YesM Location: 1667-2408 bp Feature: domain Description: YesM Location: 1 667-2408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JSKF01000088.1 (22359 bp)
Overview 1 RT 1: 20571-22357 bp Neighborhood of RT #1 [20571, 22356] RVT-GII Feature: gene Location: 20571-21476 bp Feature: gene Location: 21733-21930 bp Feature: gene Location: 22099-22356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22291-22357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 91-2 2 357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JSKF01000062.1 (126428 bp)
Overview 1 RT 1: 113009-116761 bp Neighborhood of RT #1 [113009, 116970] DinI RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 113009-113242 bp Feature: domain Description: DinI Location: 113051-113237 bp Feature: domain Description: DinI Location: 113 051-113 23 7 bp Feature: gene Location: 113411-113545 bp Feature: gene Location: 113721-114656 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113823-114417 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113 823 -114417 bp Feature: gene Location: 114656-116290 bp Feature: domain Description: COG3950 Location: 114794-116252 bp Feature: domain Description: COG3 950 Location: 114794-116252 bp Feature: gene Location: 116410-116970 bp Feature: domain Description: TIGR02646 Location: 116413-116761 bp Feature: domain Description: TIGR02646 Location: 116413 -116761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: JSKF01000037.1 (8193 bp)
Overview 1 RT 1: 6987-8112 bp Neighborhood of RT #1 [6987, 8117] RVT-GII GIIM Feature: gene Location: 6987-7205 bp Feature: gene Location: 7248-7418 bp Feature: gene Location: 7590-8117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7596-7884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7596-7884 bp Feature: domain Description: GIIM Note: maturase Location: 7932-8112 bp Feature: domain Description: GIIM Note: maturase Location: 7932-8112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JSKF01000086.1 (169506 bp)
Overview 1 RT 1: 157222-162060 bp Neighborhood of RT #1 [157222, 162071] Tra8 PHA02517 RVT-GII GIIM PHA02517 COG3440 Feature: gene Location: 157222-158016 bp Feature: domain Description: Tra8 Location: 157237-158005 bp Feature: domain Description: Tra8 Location: 15 7237-15 8005 bp Feature: gene Location: 158092-158517 bp Feature: domain Description: PHA02517 Location: 158116-158452 bp Feature: domain Description: PHA025 17 Location: 15 8116-15 845 2 bp Feature: gene Location: 159109-160632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159382-160114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 9382-160114 bp Feature: domain Description: GIIM Note: maturase Location: 160189-160387 bp Feature: domain Description: GIIM Note: maturase Location: 160189-160387 bp Feature: gene Location: 160797-161201 bp Feature: domain Description: PHA02517 Location: 160800-161190 bp Feature: domain Description: PHA025 17 Location: 160800-161190 bp Feature: gene Location: 161235-162071 bp Feature: domain Description: COG3440 Location: 161247-162060 bp Feature: domain Description: COG3440 Location: 161247-162060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3440 (Predicted restriction endonuclease )