myRT

myRT report for GCA_000778765.1_ASM77876v1

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Seq: JSPY01000034.1 (66376 bp)
Overview 1 RT 1: 18839-22266 bp Neighborhood of RT #1 [18839, 22266] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 18839-19054 bp Feature: gene Location: 19145-19426 bp Feature: domain Description: HTH_XRE Location: 19160-19325 bp Feature: domain Description: HTH_XRE Location: 1 91 60-1 9325 bp Feature: gene Location: 19419-20519 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19560-20112 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9560-201 1 2 bp Feature: gene Location: 20591-22096 bp Feature: domain Description: PRK13889 Location: 20594-21194 bp Feature: domain Description: PRK1 3889 Location: 20594-21 1 94 bp Feature: gene Location: 22129-22266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: JSPY01000048.1 (11246 bp)
Overview 1 RT 1: 2348-5822 bp Neighborhood of RT #1 [2348, 5833] InsE PHA02517 YkfC RVT-GII RVT-GII GIIM Tra5 Feature: gene Location: 2348-2578 bp Feature: domain Description: InsE Location: 2453-2573 bp Feature: domain Description: InsE Location: 2 453-2 573 bp Feature: gene Location: 2666-3079 bp Feature: domain Description: PHA02517 Location: 2786-3068 bp Feature: domain Description: PHA02 517 Location: 2 786-3068 bp Feature: gene Location: 3774-4193 bp Feature: domain Description: YkfC Location: 3783-3963 bp Feature: domain Description: YkfC Location: 3783-3963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4098-4185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4098-4185 bp Feature: gene Location: 4144-5109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4189-4774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4189-4774 bp Feature: domain Description: GIIM Note: maturase Location: 4852-5068 bp Feature: domain Description: GIIM Note: maturase Location: 4852 -5068 bp Feature: gene Location: 5113-5271 bp Feature: gene Location: 5414-5833 bp Feature: domain Description: Tra5 Location: 5420-5822 bp Feature: domain Description: Tra5 Location: 542 0-582 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), YkfC (COG3344), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)