myRT

myRT report for GCA_000778815.1_ASM77881v1

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Seq: JSKL01000144.1 (1637 bp)
Overview 1 RT 1: 166-1632 bp Neighborhood of RT #1 [166, 1634] RVT-AbiP2 PRK09183 Feature: gene Location: 166-765 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 427-763 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 427-763 bp Feature: gene Location: 804-1634 bp Feature: domain Description: PRK09183 Location: 861-1632 bp Feature: domain Description: PRK091 83 Location: 861 -1 632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional)

Seq: JSKL01000050.1 (3518 bp)
Overview 1 RT 1: 1252-2862 bp Neighborhood of RT #1 [1252, 3515] HTH_29 HTH_33 DDE_3 RVT-AbiP2 Feature: gene Location: 1252-1542 bp Feature: gene Location: 1588-2613 bp Feature: domain Description: HTH_29 Location: 1672-1843 bp Feature: domain Description: HTH_2 9 Location: 1672 -1843 bp Feature: domain Description: HTH_33 Location: 1876-2038 bp Feature: domain Description: HTH_33 Location: 1876-2 038 bp Feature: domain Description: DDE_3 Location: 2080-2509 bp Feature: domain Description: DDE_3 Location: 2 080-2 509 bp Feature: gene Location: 2715-3515 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2739-2862 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 739-2 862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2

Seq: JSKL01000203.1 (24778 bp)
Overview 1 RT 1: 11846-15376 bp Neighborhood of RT #1 [11846, 15376] PRK13699 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 11846-12499 bp Feature: domain Description: PRK13699 Location: 11891-12497 bp Feature: domain Description: PRK13 699 Location: 11891-12497 bp Feature: gene Location: 12606-12806 bp Feature: gene Location: 13079-14779 bp Feature: domain Description: RVT_N Location: 13133-13376 bp Feature: domain Description: RVT_N Location: 13 13 3 -13 3 76 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13421-14057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 421-14057 bp Feature: domain Description: GIIM Note: maturase Location: 14108-14342 bp Feature: domain Description: GIIM Note: maturase Location: 14108-143 42 bp Feature: domain Description: HNHc Note: nucleases Location: 14573-14723 bp Feature: domain Description: HNHc Note: nucleases Location: 14573 -14723 bp Feature: gene Location: 14862-15089 bp Feature: gene Location: 15155-15376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13699 (putative methylase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)