myRT

myRT report for GCA_000779095.1_ASM77909v1

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Seq: JSPE01000152.1 (18136 bp)
Overview 1 RT 1: 10288-12592 bp Neighborhood of RT #1 [10288, 12657] PRK10173 PRK10173 RVT-GII PHA02517 Feature: gene Location: 10288-10737 bp Feature: domain Description: PRK10173 Location: 10291-10729 bp Feature: domain Description: PRK1 01 73 Location: 1 0291 -1 0729 bp Feature: gene Location: 10721-11032 bp Feature: domain Description: PRK10173 Location: 10724-10943 bp Feature: domain Description: PRK1 01 73 Location: 1 0724-1 0943 bp Feature: gene Location: 11071-11574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11344-11413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 344-1 1 41 3 bp Feature: gene Location: 11528-11953 bp Feature: gene Location: 12166-12657 bp Feature: domain Description: PHA02517 Location: 12295-12592 bp Feature: domain Description: PHA0251 7 Location: 1 2295-1 2592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: JSPE01000165.1 (398873 bp)
Overview 1 RT 1: 375742-378774 bp Neighborhood of RT #1 [375742, 378774] RVT-GII GIIM RVT-GII Feature: gene Location: 375742-375912 bp Feature: gene Location: 376050-376196 bp Feature: gene Location: 376295-376816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376301-376583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376301-376583 bp Feature: domain Description: GIIM Note: maturase Location: 376631-376811 bp Feature: domain Description: GIIM Note: maturase Location: 376631-376811 bp Feature: gene Location: 376844-377383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377174-377252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377174-3772 52 bp Feature: gene Location: 377414-377611 bp Feature: gene Location: 377869-378774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JSPE01000161.1 (4178 bp)
Overview 1 RT 1: 839-4096 bp Neighborhood of RT #1 [839, 4096] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc InsE Feature: gene Location: 839-1072 bp Feature: domain Description: DUF905 Location: 869-1067 bp Feature: domain Description: DUF905 Location: 869-1067 bp Feature: gene Location: 1135-1587 bp Feature: domain Description: PRK13732 Location: 1141-1585 bp Feature: domain Description: PRK13 73 2 Location: 1141-1585 bp Feature: gene Location: 1782-3563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1929-2760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1929-2760 bp Feature: domain Description: Intron_maturas2 Location: 2874-3132 bp Feature: domain Description: Intron_maturas2 Location: 2874-3 13 2 bp Feature: domain Description: HNHc Note: nucleases Location: 3306-3468 bp Feature: domain Description: HNHc Note: nucleases Location: 3 3 06-3 468 bp Feature: gene Location: 3620-3946 bp Feature: domain Description: InsE Location: 3623-3944 bp Feature: domain Description: InsE Location: 3 623 -3 944 bp Feature: gene Location: 3968-4096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), InsE (COG2963)

Seq: JSPE01000058.1 (156778 bp)
Overview 1 RT 1: 128137-134168 bp Neighborhood of RT #1 [128137, 134168] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 128137-129057 bp Feature: domain Description: AbiEii Location: 128179-128920 bp Feature: domain Description: AbiEii Location: 128179-128920 bp Feature: gene Location: 129044-129847 bp Feature: domain Description: AbiEi_3_N Location: 129077-129338 bp Feature: domain Description: AbiEi_3_N Location: 129077-129338 bp Feature: domain Description: AbiEi_3 Location: 129350-129806 bp Feature: domain Description: AbiEi_3 Location: 129350-129806 bp Feature: gene Location: 130142-133351 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130670-131159 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130670-131159 bp Feature: domain Description: nitrilase Location: 132665-133262 bp Feature: domain Description: nitrilase Location: 132665-133262 bp Feature: gene Location: 133512-133652 bp Feature: domain Description: Phage_ASH Location: 133539-133632 bp Feature: domain Description: Phage_ASH Location: 133539-133632 bp Feature: gene Location: 133698-134168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)