myRT

myRT report for GCA_000779395.1_ASM77939v1

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Seq: JSLN01000412.1 (51610 bp)
Overview 1 RT 1: 40577-44459 bp Neighborhood of RT #1 [40577, 44464] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 40577-41293 bp Feature: domain Description: rph Location: 40580-41288 bp Feature: domain Description: rph Location: 40580-41 288 bp Feature: gene Location: 41344-42000 bp Feature: domain Description: pyrE Location: 41362-41995 bp Feature: domain Description: pyrE Location: 41 362-41 995 bp Feature: gene Location: 42298-43257 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42433-42982 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42433-42982 bp Feature: gene Location: 43303-43899 bp Feature: domain Description: slmA Location: 43309-43885 bp Feature: domain Description: slmA Location: 43309-43885 bp Feature: gene Location: 44006-44464 bp Feature: domain Description: dut Location: 44012-44459 bp Feature: domain Description: dut Location: 4401 2-44459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: JSLN01000265.1 (1187 bp)
Overview 1 RT 1: 3-962 bp Neighborhood of RT #1 [3, 1186] PHA02517 RVT-GII GIIM Feature: gene Location: 3-254 bp Feature: domain Description: PHA02517 Location: 6-255 bp Feature: domain Description: PHA02 517 Location: 6-2 55 bp Feature: gene Location: 371-1186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-668 bp Feature: domain Description: GIIM Note: maturase Location: 743-962 bp Feature: domain Description: GIIM Note: maturase Location: 743-962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JSLN01000322.1 (2117 bp)
Overview 1 RT 1: 1-2112 bp Neighborhood of RT #1 [1, 2114] RVT-GII PHA02517 InsE Feature: gene Location: 1-738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-724 bp Feature: gene Location: 1330-1809 bp Feature: domain Description: PHA02517 Location: 1390-1744 bp Feature: domain Description: PHA02517 Location: 13 90-1744 bp Feature: gene Location: 1809-2114 bp Feature: domain Description: InsE Location: 1812-2112 bp Feature: domain Description: InsE Location: 1812-2112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)