myRT

myRT report for GCA_000780235.1_ASM78023v1

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Seq: JSMU01000064.1 (103005 bp)
Overview 1 RT 1: 1-3706 bp Neighborhood of RT #1 [1, 3706] PRK09183 RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 1-834 bp Feature: domain Description: PRK09183 Location: 61-832 bp Feature: domain Description: PRK091 83 Location: 61 -832 bp Feature: gene Location: 873-2243 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1134-1590 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 1 34-1 590 bp Feature: gene Location: 2345-3382 bp Feature: domain Description: HTH_29 Location: 2441-2612 bp Feature: domain Description: HTH_29 Location: 2441 -261 2 bp Feature: domain Description: HTH_33 Location: 2645-2807 bp Feature: domain Description: HTH_33 Location: 2645-2807 bp Feature: domain Description: DDE_3 Location: 2849-3278 bp Feature: domain Description: DDE_3 Location: 2849-3278 bp Feature: gene Location: 3416-3706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09183 (transposase/IS protein; Provisional), RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)

Seq: JSMU01000013.1 (5072 bp)
Overview 1 RT 1: 105-3161 bp Neighborhood of RT #1 [105, 3199] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 105-476 bp Feature: gene Location: 770-2293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043-1775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043-1775 bp Feature: domain Description: GIIM Note: maturase Location: 1850-2048 bp Feature: domain Description: GIIM Note: maturase Location: 1850-2 048 bp Feature: gene Location: 2410-2766 bp Feature: domain Description: PHA02517 Location: 2413-2722 bp Feature: domain Description: PHA02 517 Location: 2 413-2 72 2 bp Feature: gene Location: 2795-3199 bp Feature: domain Description: InsE Location: 2825-3161 bp Feature: domain Description: InsE Location: 2 82 5-3161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JSMU01000066.1 (86405 bp)
Overview 1 RT 1: 2-2048 bp Neighborhood of RT #1 [2, 2056] PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 2-178 bp Feature: domain Description: PHA02517 Location: 5-113 bp Feature: domain Description: PHA02517 Location: 5-113 bp Feature: gene Location: 770-1273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043 -1112 bp Feature: gene Location: 1312-1623 bp Feature: domain Description: PRK10173 Location: 1315-1534 bp Feature: domain Description: PRK10173 Location: 13 15-153 4 bp Feature: gene Location: 1607-2056 bp Feature: domain Description: PRK10173 Location: 1610-2048 bp Feature: domain Description: PRK10173 Location: 1610-2048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)