myRT

myRT report for GCA_000780955.1_ASM78095v1

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Seq: JSOD01001991.1 (20671 bp)
Overview 1 RT 1: 1314-4922 bp Neighborhood of RT #1 [1314, 5044] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 1314-1550 bp Feature: gene Location: 1619-1879 bp Feature: gene Location: 2453-4120 bp Feature: RT Description: RVT_N Location: 2501-2738 bp Feature: RT Description: RVT_N Location: 2501 -2738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2789-3431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2789-3431 bp Feature: domain Description: GIIM Note: maturase Location: 3482-3716 bp Feature: domain Description: GIIM Note: maturase Location: 3482-371 6 bp Feature: domain Description: HNHc Note: nucleases Location: 3926-4085 bp Feature: domain Description: HNHc Note: nucleases Location: 3926-4085 bp Feature: gene Location: 4235-4570 bp Feature: gene Location: 4622-5044 bp Feature: domain Description: DUF1380 Location: 4625-4922 bp Feature: domain Description: DUF1 380 Location: 4625-4922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: JSOD01000499.1 (4622 bp)
Overview 1 RT 1: 2-1894 bp Neighborhood of RT #1 [2, 1899] RVT-Retrons slmA dut Feature: gene Location: 2-694 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8-419 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8-419 bp Feature: gene Location: 738-1334 bp Feature: domain Description: slmA Location: 744-1320 bp Feature: domain Description: slmA Location: 744-132 0 bp Feature: gene Location: 1441-1899 bp Feature: domain Description: dut Location: 1447-1894 bp Feature: domain Description: dut Location: 1447-1894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), RVT-Retrons, slmA (PRK09480)