myRT

myRT report for GCA_000781295.1_ASM78129v1

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Seq: JSOO01000049.1 (242661 bp)
Overview 1 RT 1: 131350-136072 bp Neighborhood of RT #1 [131350, 136164] PRK09692 RVT-Retrons Psu PRK09678 PRK09678 Feature: gene Location: 131350-132516 bp Feature: domain Description: PRK09692 Location: 131359-132511 bp Feature: domain Description: PRK09692 Location: 1 31 359-1 3251 1 bp Feature: gene Location: 132704-133381 bp Feature: gene Location: 133383-134882 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 134094-134649 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 34094-1 34649 bp Feature: gene Location: 135072-135644 bp Feature: domain Description: Psu Location: 135090-135627 bp Feature: domain Description: Psu Location: 1 35090-1 35627 bp Feature: gene Location: 135718-136164 bp Feature: domain Description: PRK09678 Location: 135727-135799 bp Feature: domain Description: PRK09678 Location: 1 35727-1 35799 bp Feature: domain Description: PRK09678 Location: 135922-136072 bp Feature: domain Description: PRK09678 Location: 1 35922-1 36072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JSOO01000052.1 (62759 bp)
Overview 1 RT 1: 56884-60805 bp Neighborhood of RT #1 [56884, 60828] CPBP Bacteriocin_IIc Bacteriocin_IIc RVT-GII GIIM RVT-GII DDE_Tnp_Tn3 Feature: gene Location: 56884-57519 bp Feature: domain Description: CPBP Location: 57217-57493 bp Feature: domain Description: CPBP Location: 572 17-57493 bp Feature: gene Location: 57749-58111 bp Feature: domain Description: Bacteriocin_IIc Location: 57752-57815 bp Feature: domain Description: Bacteriocin_IIc Location: 57752 -57815 bp Feature: domain Description: Bacteriocin_IIc Location: 57917-58013 bp Feature: domain Description: Bacteriocin_IIc Location: 57917-58013 bp Feature: gene Location: 58333-59178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58336-58738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58336-58738 bp Feature: domain Description: GIIM Note: maturase Location: 58786-59017 bp Feature: domain Description: GIIM Note: maturase Location: 58786-59017 bp Feature: gene Location: 59133-59603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59439-59520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59439-5952 0 bp Feature: gene Location: 59634-59831 bp Feature: gene Location: 60268-60828 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 60364-60805 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 60364-60805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CPBP, Bacteriocin_IIc (pfam10439), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526)

Seq: JSOO01000054.1 (71373 bp)
Overview 1 RT 1: 61974-64086 bp Neighborhood of RT #1 [61974, 64145] PHA02517 InsE RVT-GII trans_reg_C Feature: gene Location: 61974-62180 bp Feature: domain Description: PHA02517 Location: 61977-62178 bp Feature: domain Description: PHA02517 Location: 61977-62178 bp Feature: gene Location: 62347-62556 bp Feature: domain Description: InsE Location: 62359-62545 bp Feature: domain Description: InsE Location: 623 59-62545 bp Feature: gene Location: 62738-63031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62867-62957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62867-62957 bp Feature: gene Location: 63204-63545 bp Feature: gene Location: 63843-64145 bp Feature: domain Description: trans_reg_C Location: 63891-64086 bp Feature: domain Description: trans_reg_C Location: 63 891-64086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, trans_reg_C (cd00383)