myRT

myRT report for GCA_000781955.1_ASM78195v1

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Seq: JSRC01000088.1 (15543 bp)
Overview 1 RT 1: 23-3042 bp Neighborhood of RT #1 [23, 3068] RVT-GII GIIM PHA02517 SH3 Feature: gene Location: 23-394 bp Feature: gene Location: 688-2211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961-1693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961 -1 693 bp Feature: domain Description: GIIM Note: maturase Location: 1768-1966 bp Feature: domain Description: GIIM Note: maturase Location: 1 768-1 966 bp Feature: gene Location: 2388-2774 bp Feature: domain Description: PHA02517 Location: 2391-2772 bp Feature: domain Description: PHA0251 7 Location: 2391 -2772 bp Feature: gene Location: 2874-3068 bp Feature: domain Description: SH3 Location: 2925-3042 bp Feature: domain Description: SH3 Location: 2925-3042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), SH3 (smart00326)

Seq: JSRC01000008.1 (29666 bp)
Overview 1 RT 1: 1239-4709 bp Neighborhood of RT #1 [1239, 4816] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 1239-1541 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1248-1500 bp Feature: domain Description: Arm-DNA-bind_3 Location: 12 48-1500 bp Feature: gene Location: 1725-1970 bp Feature: gene Location: 1996-2928 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2098-2692 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 098-2 692 bp Feature: gene Location: 2930-3916 bp Feature: gene Location: 4544-4816 bp Feature: domain Description: PRK09678 Location: 4553-4709 bp Feature: domain Description: PRK09678 Location: 4553-4709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JSRC01000120.1 (24433 bp)
Overview 1 RT 1: 13357-18694 bp Neighborhood of RT #1 [13357, 18702] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Feature: gene Location: 13357-14274 bp Feature: domain Description: PFLE_PFLC Location: 13393-14248 bp Feature: domain Description: PFLE_PFLC Location: 13 3 93 -14248 bp Feature: gene Location: 14411-15316 bp Feature: gene Location: 15802-16341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16132-16210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1613 2-16210 bp Feature: gene Location: 16369-16890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16375-16657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163 75-16657 bp Feature: domain Description: GIIM Note: maturase Location: 16705-16885 bp Feature: domain Description: GIIM Note: maturase Location: 16705-16885 bp Feature: gene Location: 17212-17400 bp Feature: gene Location: 17440-18702 bp Feature: domain Description: YesM Location: 17953-18694 bp Feature: domain Description: YesM Location: 17953 -18694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972)