myRT

myRT report for GCA_000782035.1_ASM78203v1

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Seq: JSRG01000035.1 (39600 bp)
Overview 1 RT 1: 36171-39534 bp Neighborhood of RT #1 [36171, 39599] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 36171-36575 bp Feature: domain Description: InsE Location: 36201-36537 bp Feature: domain Description: InsE Location: 36201 -36537 bp Feature: gene Location: 36604-36960 bp Feature: domain Description: PHA02517 Location: 36607-36916 bp Feature: domain Description: PHA0251 7 Location: 36607-3691 6 bp Feature: gene Location: 37077-38600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37350-38082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37350-38082 bp Feature: domain Description: GIIM Note: maturase Location: 38157-38355 bp Feature: domain Description: GIIM Note: maturase Location: 381 57-38355 bp Feature: gene Location: 38554-38979 bp Feature: gene Location: 39192-39599 bp Feature: domain Description: PHA02517 Location: 39195-39534 bp Feature: domain Description: PHA0251 7 Location: 391 95-39534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JSRG01000053.1 (353800 bp)
Overview 1 RT 1: 291916-296930 bp Neighborhood of RT #1 [291916, 296935] RVT-Retrons Q P Feature: gene Location: 291916-292071 bp Feature: gene Location: 292329-293177 bp Feature: gene Location: 293179-294108 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 293278-293863 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 932 78-2 93863 bp Feature: gene Location: 294144-295169 bp Feature: domain Description: Q Location: 294147-295161 bp Feature: domain Description: Q Location: 2 94147-2 95161 bp Feature: gene Location: 295169-296935 bp Feature: domain Description: P Location: 295196-296930 bp Feature: domain Description: P Location: 2 95196-2 96930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: JSRG01000039.1 (10697 bp)
Overview 1 RT 1: 3-1335 bp 2 RT 2: 9287-10696 bp Neighborhood of RT #1 [3, 1400] RVT-GII PHA02517 Neighborhood of RT #2 [9287, 10695] PHA02517 RVT-GII Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-3 3 0 bp Feature: gene Location: 283-708 bp Feature: gene Location: 921-1400 bp Feature: domain Description: PHA02517 Location: 981-1335 bp Feature: domain Description: PHA02517 Location: 981-13 3 5 bp Feature: gene Location: 9287-9448 bp Feature: gene Location: 9496-9777 bp Feature: domain Description: PHA02517 Location: 9502-9712 bp Feature: domain Description: PHA02517 Location: 9502-9712 bp Feature: gene Location: 10369-10695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10642-10696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10642-10696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: JSRG01000048.1 (55969 bp)
Overview 1 RT 1: 2-2279 bp Neighborhood of RT #1 [2, 2287] PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 2-409 bp Feature: domain Description: PHA02517 Location: 5-344 bp Feature: domain Description: PHA02517 Location: 5-34 4 bp Feature: gene Location: 1001-1504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274 -134 6 bp Feature: gene Location: 1543-1854 bp Feature: domain Description: PRK10173 Location: 1546-1765 bp Feature: domain Description: PRK10173 Location: 154 6-1765 bp Feature: gene Location: 1838-2287 bp Feature: domain Description: PRK10173 Location: 1841-2279 bp Feature: domain Description: PRK10173 Location: 184 1-2279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), PHA02517 (putative transposase OrfB; Reviewed)