myRT

myRT report for GCA_000782155.1_ASM78215v1

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Seq: JSRM01000048.1 (156778 bp)
Overview 1 RT 1: 128137-134168 bp Neighborhood of RT #1 [128137, 134168] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 128137-129057 bp Feature: domain Description: AbiEii Location: 128179-128920 bp Feature: domain Description: AbiEii Location: 1 281 79-1 28920 bp Feature: gene Location: 129044-129847 bp Feature: domain Description: AbiEi_3_N Location: 129077-129338 bp Feature: domain Description: AbiEi_3_N Location: 1 29077-1 29338 bp Feature: domain Description: AbiEi_3 Location: 129350-129806 bp Feature: domain Description: AbiEi_3 Location: 1 29350-1 29806 bp Feature: gene Location: 130142-133351 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130670-131159 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 30670-1 31 1 59 bp Feature: domain Description: nitrilase Location: 132665-133262 bp Feature: domain Description: nitrilase Location: 1 32665-1 33262 bp Feature: gene Location: 133512-133652 bp Feature: domain Description: Phage_ASH Location: 133539-133632 bp Feature: domain Description: Phage_ASH Location: 1 33539-1 33632 bp Feature: gene Location: 133698-134168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JSRM01000066.1 (8124 bp)
Overview 1 RT 1: 233-3335 bp Neighborhood of RT #1 [233, 3340] InsE RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 233-559 bp Feature: domain Description: InsE Location: 236-557 bp Feature: domain Description: InsE Location: 2 36-557 bp Feature: gene Location: 616-2397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 763-1594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 763-1594 bp Feature: domain Description: Intron_maturas2 Location: 1708-1966 bp Feature: domain Description: Intron_maturas2 Location: 1708-1966 bp Feature: domain Description: HNHc Note: nucleases Location: 2140-2302 bp Feature: domain Description: HNHc Note: nucleases Location: 2 140-2 302 bp Feature: gene Location: 2592-3044 bp Feature: domain Description: PRK13732 Location: 2598-3042 bp Feature: domain Description: PRK13732 Location: 2 598-3042 bp Feature: gene Location: 3107-3340 bp Feature: domain Description: DUF905 Location: 3137-3335 bp Feature: domain Description: DUF905 Location: 3137-3335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: JSRM01000126.1 (18373 bp)
Overview 1 RT 1: 4662-8078 bp Neighborhood of RT #1 [4662, 8086] PRK09183 PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 4662-5441 bp Feature: domain Description: PRK09183 Location: 4668-5439 bp Feature: domain Description: PRK09183 Location: 4668-543 9 bp Feature: gene Location: 5927-6208 bp Feature: domain Description: PHA02517 Location: 5933-6143 bp Feature: domain Description: PHA02517 Location: 593 3 -6143 bp Feature: gene Location: 6800-7303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7073-7142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7073 -7142 bp Feature: gene Location: 7342-7653 bp Feature: domain Description: PRK10173 Location: 7345-7564 bp Feature: domain Description: PRK10173 Location: 73 45-7564 bp Feature: gene Location: 7637-8086 bp Feature: domain Description: PRK10173 Location: 7640-8078 bp Feature: domain Description: PRK10173 Location: 7640-8078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09183 (transposase/IS protein; Provisional), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: JSRM01000124.1 (57219 bp)
Overview 1 RT 1: 27593-30615 bp Neighborhood of RT #1 [27593, 30615] RVT-GII RVT-GII GIIM Feature: gene Location: 27593-28498 bp Feature: gene Location: 28756-28953 bp Feature: gene Location: 28984-29523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29314-29392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29314 -29392 bp Feature: gene Location: 29551-30072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29557-29839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29557-29839 bp Feature: domain Description: GIIM Note: maturase Location: 29887-30067 bp Feature: domain Description: GIIM Note: maturase Location: 29887-30067 bp Feature: gene Location: 30171-30317 bp Feature: gene Location: 30427-30615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)