myRT

myRT report for GCA_000782335.1_ASM78233v1

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Seq: JSRW01000154.1 (26473 bp)
Overview 1 RT 1: 6676-11380 bp Neighborhood of RT #1 [6676, 11391] COG4584 RVT-GII GIIM PHA02517 TetR_N TetR_C_28 Feature: gene Location: 6676-7089 bp Feature: domain Description: COG4584 Location: 6679-7063 bp Feature: domain Description: COG4584 Location: 6679-7063 bp Feature: gene Location: 7653-8024 bp Feature: gene Location: 8318-9841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8591-9323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8591 -9323 bp Feature: domain Description: GIIM Note: maturase Location: 9398-9596 bp Feature: domain Description: GIIM Note: maturase Location: 9398-9596 bp Feature: gene Location: 9974-10522 bp Feature: domain Description: PHA02517 Location: 10082-10520 bp Feature: domain Description: PHA0251 7 Location: 1 0082-1 0520 bp Feature: gene Location: 10813-11391 bp Feature: domain Description: TetR_N Location: 10882-11017 bp Feature: domain Description: TetR_N Location: 1 0882-1 1 01 7 bp Feature: domain Description: TetR_C_28 Location: 11092-11380 bp Feature: domain Description: TetR_C_28 Location: 1 1 092-1 1 380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), TetR_C_28 (pfam17937), COG4584 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JSRW01000163.1 (152420 bp)
Overview 1 RT 1: 116234-120116 bp Neighborhood of RT #1 [116234, 120121] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 116234-116692 bp Feature: domain Description: dut Location: 116240-116687 bp Feature: domain Description: dut Location: 1162 40-116687 bp Feature: gene Location: 116799-117395 bp Feature: domain Description: slmA Location: 116805-117381 bp Feature: domain Description: slmA Location: 116805-117381 bp Feature: gene Location: 117441-118400 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117576-118125 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117576-11812 5 bp Feature: gene Location: 118698-119354 bp Feature: domain Description: pyrE Location: 118716-119349 bp Feature: domain Description: pyrE Location: 118716-119349 bp Feature: gene Location: 119405-120121 bp Feature: domain Description: rph Location: 119408-120116 bp Feature: domain Description: rph Location: 119408-12 0116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)