myRT

myRT report for GCA_000782555.1_ASM78255v1

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Seq: JSSG01000013.1 (7990 bp)
Overview 1 RT 1: 3375-7987 bp Neighborhood of RT #1 [3375, 7987] LysM IAT_beta PRK15318 Invasin_D3 PHA02517 RVT-GII GIIM Feature: gene Location: 3375-5252 bp Feature: domain Description: LysM Location: 3615-3753 bp Feature: domain Description: LysM Location: 361 5-3753 bp Feature: domain Description: IAT_beta Location: 3834-4659 bp Feature: domain Description: IAT_beta Location: 3834-4659 bp Feature: domain Description: PRK15318 Location: 4860-4983 bp Feature: domain Description: PRK1 531 8 Location: 4860-4983 bp Feature: domain Description: Invasin_D3 Location: 4998-5235 bp Feature: domain Description: Invasin_D3 Location: 4998-5235 bp Feature: gene Location: 5254-5688 bp Feature: domain Description: PHA02517 Location: 5257-5680 bp Feature: domain Description: PHA0251 7 Location: 5257-5680 bp Feature: gene Location: 5811-7334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6084-6816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6084-681 6 bp Feature: domain Description: GIIM Note: maturase Location: 6891-7089 bp Feature: domain Description: GIIM Note: maturase Location: 6891 -7089 bp Feature: gene Location: 7628-7987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysM (smart00257), IAT_beta (pfam11924), PRK15318 (intimin-like protein SinH; Provisional), Invasin_D3 (pfam09134), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JSSG01000071.1 (326895 bp)
Overview 1 RT 1: 20256-26264 bp Neighborhood of RT #1 [20256, 26281] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 20256-21509 bp Feature: domain Description: proA Location: 20283-21474 bp Feature: domain Description: proA Location: 2 02 83-2 1474 bp Feature: gene Location: 21864-23048 bp Feature: domain Description: PRK09692 Location: 21870-23025 bp Feature: domain Description: PRK09692 Location: 2 1870-2 302 5 bp Feature: gene Location: 23041-24669 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 23449-23878 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 3449-2 3878 bp Feature: gene Location: 24666-25406 bp Feature: gene Location: 25709-26281 bp Feature: domain Description: Psu Location: 25727-26264 bp Feature: domain Description: Psu Location: 2 572 7-2 62 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: JSSG01000033.1 (18707 bp)
Overview 1 RT 1: 92-2567 bp Neighborhood of RT #1 [92, 2632] RVT-GII GIIM PHA02517 Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 65-1097 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1172-13 70 bp Feature: gene Location: 1569-1994 bp Feature: gene Location: 2207-2632 bp Feature: domain Description: PHA02517 Location: 2228-2567 bp Feature: domain Description: PHA02517 Location: 2228-2567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JSSG01000028.1 (58461 bp)
Overview 1 RT 1: 51528-55410 bp Neighborhood of RT #1 [51528, 55415] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51528-51986 bp Feature: domain Description: dut Location: 51534-51981 bp Feature: domain Description: dut Location: 51534 -51981 bp Feature: gene Location: 52093-52689 bp Feature: domain Description: slmA Location: 52099-52675 bp Feature: domain Description: slmA Location: 52099-52675 bp Feature: gene Location: 52735-53694 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52870-53419 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52870-534 19 bp Feature: gene Location: 53992-54648 bp Feature: domain Description: pyrE Location: 54010-54643 bp Feature: domain Description: pyrE Location: 54 010-54 64 3 bp Feature: gene Location: 54699-55415 bp Feature: domain Description: rph Location: 54702-55410 bp Feature: domain Description: rph Location: 54 702-554 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)