myRT

myRT report for GCA_000782595.1_ASM78259v1

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Seq: JSSI01000070.1 (326498 bp)
Overview 1 RT 1: 20010-26018 bp Neighborhood of RT #1 [20010, 26035] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 20010-21263 bp Feature: domain Description: proA Location: 20037-21228 bp Feature: domain Description: proA Location: 20037-21 228 bp Feature: gene Location: 21618-22802 bp Feature: domain Description: PRK09692 Location: 21624-22779 bp Feature: domain Description: PRK09692 Location: 21 624-22779 bp Feature: gene Location: 22795-24423 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 23203-23632 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 23203-23632 bp Feature: gene Location: 24420-25160 bp Feature: gene Location: 25463-26035 bp Feature: domain Description: Psu Location: 25481-26018 bp Feature: domain Description: Psu Location: 25481 -2601 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: JSSI01000051.1 (58261 bp)
Overview 1 RT 1: 51328-55210 bp Neighborhood of RT #1 [51328, 55215] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51328-51786 bp Feature: domain Description: dut Location: 51334-51781 bp Feature: domain Description: dut Location: 51334-51781 bp Feature: gene Location: 51893-52489 bp Feature: domain Description: slmA Location: 51899-52475 bp Feature: domain Description: slmA Location: 51899-52 475 bp Feature: gene Location: 52535-53494 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52670-53219 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 670-532 19 bp Feature: gene Location: 53792-54448 bp Feature: domain Description: pyrE Location: 53810-54443 bp Feature: domain Description: pyrE Location: 53810-54443 bp Feature: gene Location: 54499-55215 bp Feature: domain Description: rph Location: 54502-55210 bp Feature: domain Description: rph Location: 54502 -552 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JSSI01000012.1 (7990 bp)
Overview 1 RT 1: 3375-7987 bp Neighborhood of RT #1 [3375, 7987] LysM IAT_beta PRK15318 Invasin_D3 PHA02517 RVT-GII GIIM Feature: gene Location: 3375-5252 bp Feature: domain Description: LysM Location: 3615-3753 bp Feature: domain Description: LysM Location: 3 615-3 753 bp Feature: domain Description: IAT_beta Location: 3834-4659 bp Feature: domain Description: IAT_beta Location: 3 83 4-4659 bp Feature: domain Description: PRK15318 Location: 4860-4983 bp Feature: domain Description: PRK153 18 Location: 4860-4983 bp Feature: domain Description: Invasin_D3 Location: 4998-5235 bp Feature: domain Description: Invasin_D3 Location: 4998-523 5 bp Feature: gene Location: 5254-5688 bp Feature: domain Description: PHA02517 Location: 5257-5680 bp Feature: domain Description: PHA02517 Location: 5257-5680 bp Feature: gene Location: 5811-7334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6084-6816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6084-6816 bp Feature: domain Description: GIIM Note: maturase Location: 6891-7089 bp Feature: domain Description: GIIM Note: maturase Location: 6891-7089 bp Feature: gene Location: 7628-7987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysM (smart00257), IAT_beta (pfam11924), PRK15318 (intimin-like protein SinH; Provisional), Invasin_D3 (pfam09134), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JSSI01000034.1 (18707 bp)
Overview 1 RT 1: 92-2567 bp Neighborhood of RT #1 [92, 2632] RVT-GII GIIM PHA02517 Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: gene Location: 1569-1994 bp Feature: gene Location: 2207-2632 bp Feature: domain Description: PHA02517 Location: 2228-2567 bp Feature: domain Description: PHA02517 Location: 2228-2567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)