myRT

myRT report for GCA_000782695.1_ASM78269v1

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Seq: JSSN01000057.1 (56005 bp)
Overview 1 RT 1: 54040-55991 bp Neighborhood of RT #1 [54040, 55991] PRK10173 PRK10173 RVT-GII Feature: gene Location: 54040-54489 bp Feature: domain Description: PRK10173 Location: 54043-54481 bp Feature: domain Description: PRK1 01 73 Location: 54043-54481 bp Feature: gene Location: 54473-54784 bp Feature: domain Description: PRK10173 Location: 54476-54695 bp Feature: domain Description: PRK1 01 73 Location: 54476-54695 bp Feature: gene Location: 54823-55326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55096-55168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55096-551 68 bp Feature: gene Location: 55620-55991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: JSSN01000019.1 (3982 bp)
Overview 1 RT 1: 3-2188 bp Neighborhood of RT #1 [3, 2922] RVT-GII rve Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76-330 bp Feature: gene Location: 960-1178 bp Feature: gene Location: 1423-2922 bp Feature: domain Description: rve Location: 1795-2188 bp Feature: domain Description: rve Location: 1795-2 188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII

Seq: JSSN01000018.1 (7846 bp)
Overview 1 RT 1: 15-3071 bp Neighborhood of RT #1 [15, 3109] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 15-386 bp Feature: gene Location: 680-2203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953-1685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953 -1685 bp Feature: domain Description: GIIM Note: maturase Location: 1760-1958 bp Feature: domain Description: GIIM Note: maturase Location: 1760-1958 bp Feature: gene Location: 2380-2676 bp Feature: domain Description: PHA02517 Location: 2383-2632 bp Feature: domain Description: PHA02517 Location: 23 83 -263 2 bp Feature: gene Location: 2705-3109 bp Feature: domain Description: InsE Location: 2735-3071 bp Feature: domain Description: InsE Location: 273 5-3 071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388)