myRT

myRT report for GCA_000783555.2_ASM78355v2

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Seq: JTAZ02000010.1 Burkholderia cenocepacia strain FDAARGOS_82 scf7180000000041_quiver_pilon, whole genome shotgun sequence (438523 bp)
Overview 1 RT 1: 299615-303411 bp Neighborhood of RT #1 [299615, 303416] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 299615-299944 bp Feature: domain Description: Histone_HNS Location: 299636-299873 bp Feature: domain Description: Histone_HNS Location: 299636-299873 bp Feature: gene Location: 300090-300291 bp Feature: gene Location: 300264-301613 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 300729-301365 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 300729-301 365 bp Feature: gene Location: 301866-302438 bp Feature: domain Description: FIN Location: 302046-302403 bp Feature: domain Description: FIN Location: 302046-302403 bp Feature: gene Location: 302661-303416 bp Feature: domain Description: his_ut_repres Location: 302739-303411 bp Feature: domain Description: his_ut_repres Location: 302739-30341 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: JTAZ02000004.1 Burkholderia cenocepacia strain FDAARGOS_82 scf7180000000047_quiver_pilon, whole genome shotgun sequence (2020922 bp)
Overview 1 RT 1: 1431126-1436266 bp Neighborhood of RT #1 [1431126, 1436271] Gmd GDP_MD_SDR_e RVT-GII GIIM PRK08133 Feature: gene Location: 1431126-1432172 bp Feature: domain Description: Gmd Location: 1431141-1432158 bp Feature: domain Description: Gmd Location: 1431141-1432 158 bp Feature: gene Location: 1432159-1433124 bp Feature: domain Description: GDP_MD_SDR_e Location: 1432195-1433092 bp Feature: domain Description: GDP_MD_SDR_e Location: 1432 195-1433092 bp Feature: gene Location: 1433245-1434612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1433578-1434193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1433578-1434193 bp Feature: domain Description: GIIM Note: maturase Location: 1434253-1434454 bp Feature: domain Description: GIIM Note: maturase Location: 14342 53-1434454 bp Feature: gene Location: 1434683-1435012 bp Feature: gene Location: 1435081-1436271 bp Feature: domain Description: PRK08133 Location: 1435087-1436266 bp Feature: domain Description: PRK08133 Location: 1435087-14362 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gmd (COG1089), GDP_MD_SDR_e (cd05260), RVT-GII, GIIM (pfam08388), PRK08133 (O-succinylhomoserine sulfhydrylase; Validated)

Seq: JTAZ02000012.1 Burkholderia cenocepacia strain FDAARGOS_82 scf7180000000039_quiver_pilon, whole genome shotgun sequence (332007 bp)
Overview 1 RT 1: 50635-54545 bp Neighborhood of RT #1 [50635, 54553] RlpA RVT-GII GIIM RsmI PRK14673 Feature: gene Location: 50635-51246 bp Feature: domain Description: RlpA Location: 50710-51211 bp Feature: domain Description: RlpA Location: 50710-51211 bp Feature: gene Location: 51316-51645 bp Feature: gene Location: 51716-53083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52049-52664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52049-52664 bp Feature: domain Description: GIIM Note: maturase Location: 52724-52925 bp Feature: domain Description: GIIM Note: maturase Location: 52724-52925 bp Feature: gene Location: 53191-54078 bp Feature: domain Description: RsmI Location: 53239-54052 bp Feature: domain Description: RsmI Location: 53 23 9-54052 bp Feature: gene Location: 54077-54553 bp Feature: domain Description: PRK14673 Location: 54128-54545 bp Feature: domain Description: PRK14673 Location: 54128-54545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlpA (COG0797), RVT-GII, GIIM (pfam08388), RsmI (COG0313), PRK14673 (hypothetical protein; Provisional)

Seq: JTAZ02000009.1 Burkholderia cenocepacia strain FDAARGOS_82 scf7180000000042_quiver_pilon, whole genome shotgun sequence (95760 bp)
Overview 1 RT 1: 54744-62545 bp Neighborhood of RT #1 [54744, 62586] MFS_SV2_like MscK RVT-GII GIIM ALDH_F7_AASADH Feature: gene Location: 54744-56162 bp Feature: domain Description: MFS_SV2_like Location: 54864-56112 bp Feature: domain Description: MFS_SV2_like Location: 54 864 -56112 bp Feature: gene Location: 56619-59081 bp Feature: domain Description: MscK Location: 56715-59037 bp Feature: domain Description: MscK Location: 56715-59037 bp Feature: gene Location: 59225-60592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59558-60173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59558-60173 bp Feature: domain Description: GIIM Note: maturase Location: 60233-60434 bp Feature: domain Description: GIIM Note: maturase Location: 60233-604 34 bp Feature: gene Location: 60663-60992 bp Feature: gene Location: 61075-62586 bp Feature: domain Description: ALDH_F7_AASADH Location: 61129-62545 bp Feature: domain Description: ALDH_F7_AASADH Location: 61129-6254 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_SV2_like (cd17316), MscK (COG3264), RVT-GII, GIIM (pfam08388), ALDH_F7_AASADH (cd07130)