myRT

myRT report for GCA_000785665.1_ASM78566v1

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Seq: JRJV01000097.1 Xenorhabdus nematophila strain C2-3 Contig097, whole genome shotgun sequence (17295 bp)
Overview 1 RT 1: 1348-7485 bp Neighborhood of RT #1 [1348, 7485] DDE_Tnp_Tn3 DUF4158 RVT-GII Feature: gene Location: 1348-2823 bp Ori: KHD27458.1 Feature: domain Description: DDE_Tnp_Tn3 Location: 2203-2815 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 2203-281 5 bp Feature: gene Location: 2768-3739 bp Ori: KHD27459.1 Feature: domain Description: DUF4158 Location: 2801-3287 bp Feature: domain Description: DUF41 58 Location: 2801 -3287 bp Feature: gene Location: 4570-4875 bp Ori: KHD27460.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4648-4804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4648-4804 bp Feature: gene Location: 5351-6436 bp Feature: gene Location: 7150-7485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), DUF4158 (pfam13700), RVT-GII

Seq: JRJV01000124.1 Xenorhabdus nematophila strain C2-3 Contig124, whole genome shotgun sequence (3182 bp)
Overview 1 RT 1: 1-3182 bp Neighborhood of RT #1 [1, 3182] RVT-GII GIIM PRK10635 Feature: gene Location: 1-1005 bp Ori: KHD27315.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-607 bp Feature: domain Description: GIIM Note: maturase Location: 688-907 bp Feature: domain Description: GIIM Note: maturase Location: 688-907 bp Feature: gene Location: 2167-2643 bp Ori: KHD27316.1 Feature: domain Description: PRK10635 Location: 2170-2638 bp Feature: domain Description: PRK10635 Location: 2 170-2 638 bp Feature: gene Location: 2765-3182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK10635 (bacterioferritin; Provisional)

Seq: JRJV01000096.1 Xenorhabdus nematophila strain C2-3 Contig096, whole genome shotgun sequence (5937 bp)
Overview 1 RT 1: 3976-5927 bp Neighborhood of RT #1 [3976, 5937] PinE RVT-GII Feature: gene Location: 3976-4551 bp Ori: KHD27472.1 Feature: domain Description: PinE Location: 3994-4543 bp Feature: domain Description: PinE Location: 3 994-4543 bp Feature: gene Location: 4548-4820 bp Feature: gene Location: 5396-5937 bp Ori: KHD27474.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5600-5927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5600-5927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII

Seq: JRJV01000228.1 Xenorhabdus nematophila strain C2-3 Contig228, whole genome shotgun sequence (2061 bp)
Overview 1 RT 1: 1-873 bp Neighborhood of RT #1 [1, 873] RVT-GII Feature: gene Location: 1-492 bp Ori: KHD27057.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -4 66 bp Feature: gene Location: 676-873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII