myRT

myRT report for GCA_000786015.1_Bac_ginsengihumi_spades2

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Seq: JRUN01000105.1 Bacillus ginsengihumi strain M2.11 NODE_105, whole genome shotgun sequence (4485 bp)
Overview 1 RT 1: 62-2983 bp Neighborhood of RT #1 [62, 3096] RVT-Retrons COG3440 Feature: gene Location: 62-523 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116-518 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 6-51 8 bp Feature: gene Location: 1322-1930 bp Feature: gene Location: 2392-3096 bp Feature: domain Description: COG3440 Location: 2746-2983 bp Feature: domain Description: COG3440 Location: 2746-2983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3440 (Predicted restriction endonuclease ), RVT-Retrons

Seq: JRUN01000003.1 Bacillus ginsengihumi strain M2.11 NODE_3, whole genome shotgun sequence (118129 bp)
Overview 1 RT 1: 92809-98541 bp Neighborhood of RT #1 [92809, 98552] GlpR PRK11579 RVT-GII GIIM Tas PRK12378 Feature: gene Location: 92809-93594 bp Feature: domain Description: GlpR Location: 92812-93556 bp Feature: domain Description: GlpR Location: 92 812 -93556 bp Feature: gene Location: 93581-94636 bp Feature: domain Description: PRK11579 Location: 93587-94616 bp Feature: domain Description: PRK11579 Location: 93587-94616 bp Feature: gene Location: 94710-95969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94908-95526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94908-9552 6 bp Feature: domain Description: GIIM Note: maturase Location: 95574-95787 bp Feature: domain Description: GIIM Note: maturase Location: 95574-95787 bp Feature: gene Location: 96710-97693 bp Feature: domain Description: Tas Location: 96713-97658 bp Feature: domain Description: Tas Location: 96713-97658 bp Feature: gene Location: 97833-98552 bp Feature: domain Description: PRK12378 Location: 97836-98541 bp Feature: domain Description: PRK12 378 Location: 97836-98541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlpR (COG1349), PRK11579 (putative oxidoreductase; Provisional), RVT-GII, GIIM (pfam08388), Tas (COG0667), PRK12378 (YebC/PmpR family DNA-binding transcriptional regulator)