myRT

myRT report for GCA_000786845.1_T9109

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Seq: JTGR01000016.1 Vibrio parahaemolyticus strain T9109 contig17, whole genome shotgun sequence (18762 bp)
Overview 1 RT 1: 11037-17438 bp Neighborhood of RT #1 [11037, 17438] HNH_4 RVT-UG8 RVT-UG3 SLATT_5 Feature: gene Location: 11037-12035 bp Ori: KHF11274.1 Feature: domain Description: HNH_4 Location: 11652-11787 bp Feature: domain Description: HNH_4 Location: 1 1 652-1 1 787 bp Feature: gene Location: 12132-12800 bp Feature: gene Location: 12979-14958 bp Ori: KHF11276.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 13495-13957 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 3495-1 3957 bp Feature: gene Location: 14955-16196 bp Ori: KHF11277.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 15243-15705 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 5243-1 5705 bp Feature: gene Location: 16190-16804 bp Ori: KHF11278.1 Feature: domain Description: SLATT_5 Location: 16202-16775 bp Feature: domain Description: SLATT_5 Location: 1 6202-1 6775 bp Feature: gene Location: 17220-17438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH_4 (pfam13395), RVT-UG8, RVT-UG3, SLATT_5 (pfam18160)

Seq: JTGR01000164.1 Vibrio parahaemolyticus strain T9109 contig167, whole genome shotgun sequence (238098 bp)
Overview 1 RT 1: 147894-151280 bp Neighborhood of RT #1 [147894, 151711] SmpB PRK09692 RVT-UG3 Feature: gene Location: 147894-148379 bp Ori: KHF05480.1 Feature: domain Description: SmpB Location: 147924-148371 bp Feature: domain Description: SmpB Location: 14792 4-148371 bp Feature: gene Location: 149001-150224 bp Ori: KHF05481.1 Feature: domain Description: PRK09692 Location: 149004-150204 bp Feature: domain Description: PRK09692 Location: 149004-1502 04 bp Feature: gene Location: 150530-151711 bp Ori: KHF05482.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 150818-151280 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 150818-1512 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), PRK09692 (Integrase; provisional), RVT-UG3