myRT

myRT report for GCA_000787755.1_ASM78775v1

Download annotations/find similar RTs

Seq: BBPL01000150.1 Streptacidiphilus albus DNA, contig: scaffold00150, whole genome shotgun sequence (2688 bp)
Overview 1 RT 1: 1-2084 bp Neighborhood of RT #1 [1, 2173] PHA02517 RVT-GII GIIM Feature: gene Location: 1-996 bp Feature: domain Description: PHA02517 Location: 280-994 bp Feature: domain Description: PHA0251 7 Location: 280-994 bp Feature: gene Location: 914-2173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130-1787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 30-1 787 bp Feature: domain Description: GIIM Note: maturase Location: 1865-2084 bp Feature: domain Description: GIIM Note: maturase Location: 1 865-2084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BBPL01000026.1 Streptacidiphilus albus DNA, contig: scaffold00026, whole genome shotgun sequence (111530 bp)
Overview 1 RT 1: 76160-82198 bp Neighborhood of RT #1 [76160, 82248] PLN02856 RVT-GII GIIM HEAT_2 HEAT ftrA Feature: gene Location: 76160-77113 bp Feature: gene Location: 77110-78318 bp Feature: domain Description: PLN02856 Location: 77116-78307 bp Feature: domain Description: PLN02 856 Location: 77116-78307 bp Feature: gene Location: 78548-79963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78824-79508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7882 4-79508 bp Feature: domain Description: GIIM Note: maturase Location: 79580-79790 bp Feature: domain Description: GIIM Note: maturase Location: 79580-79790 bp Feature: gene Location: 80684-81253 bp Feature: domain Description: HEAT_2 Location: 80894-81128 bp Feature: domain Description: HEAT_2 Location: 80894-8112 8 bp Feature: domain Description: HEAT Location: 81161-81230 bp Feature: domain Description: HEAT Location: 81161-812 30 bp Feature: gene Location: 81268-82248 bp Feature: domain Description: ftrA Location: 81280-82198 bp Feature: domain Description: ftrA Location: 812 80-82 198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN02856 (fumarylacetoacetase), RVT-GII, GIIM (pfam08388), HEAT_2 (pfam13646), HEAT (sd00044), ftrA (PRK09393)

Seq: BBPL01000002.1 Streptacidiphilus albus DNA, contig: scaffold00002, whole genome shotgun sequence (421839 bp)
Overview 1 RT 1: 825-5707 bp Neighborhood of RT #1 [825, 5769] COG5421 COG5421 RVT-GII GIIM MarR_2 MarR_2 Feature: gene Location: 825-2528 bp Feature: domain Description: COG5421 Location: 1518-1758 bp Feature: domain Description: COG5421 Location: 1518-1758 bp Feature: domain Description: COG5421 Location: 2094-2346 bp Feature: domain Description: COG5421 Location: 2094-23 46 bp Feature: gene Location: 2616-3899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2877-3501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2877-3 501 bp Feature: domain Description: GIIM Note: maturase Location: 3594-3801 bp Feature: domain Description: GIIM Note: maturase Location: 3 594-3 801 bp Feature: gene Location: 4219-4626 bp Feature: gene Location: 4825-5769 bp Feature: domain Description: MarR_2 Location: 4909-5044 bp Feature: domain Description: MarR_2 Location: 4909-5044 bp Feature: domain Description: MarR_2 Location: 5587-5707 bp Feature: domain Description: MarR_2 Location: 5587-5707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MarR_2 (pfam12802), COG5421 (Transposase )