myRT

myRT report for GCA_000787815.1_ASM78781v1

Download annotations/find similar RTs

Seq: BBPO01000028.1 Streptacidiphilus neutrinimicus DNA, contig: scaffold00028, whole genome shotgun sequence (96689 bp)
Overview 1 RT 1: 51554-57339 bp Neighborhood of RT #1 [51554, 57476] RVT-GII Intron_maturas2 HNHc DEDD_Tnp_IS110 DUF4096 Feature: gene Location: 51554-52069 bp Feature: gene Location: 52445-52795 bp Feature: gene Location: 53022-54803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53283-54078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53283-54078 bp Feature: domain Description: Intron_maturas2 Location: 54195-54411 bp Feature: domain Description: Intron_maturas2 Location: 541 95-5441 1 bp Feature: domain Description: HNHc Note: nucleases Location: 54603-54759 bp Feature: domain Description: HNHc Note: nucleases Location: 54603-54759 bp Feature: gene Location: 55842-56627 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 55941-56406 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 55941 -56406 bp Feature: gene Location: 57078-57476 bp Feature: domain Description: DUF4096 Location: 57108-57339 bp Feature: domain Description: DUF4096 Location: 571 08-57339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DEDD_Tnp_IS110 (pfam01548), DUF4096 (pfam13340)

Seq: BBPO01000018.1 Streptacidiphilus neutrinimicus DNA, contig: scaffold00018, whole genome shotgun sequence (117649 bp)
Overview 1 RT 1: 75641-83843 bp Neighborhood of RT #1 [75641, 84748] Phage_int_SAM_3 INT_ICEBs1_C_like DDE_Tnp_1_3 RVT-GII GIIM Lhr Feature: gene Location: 75641-77167 bp Feature: domain Description: Phage_int_SAM_3 Location: 76013-76163 bp Feature: domain Description: Phage_int_SAM_3 Location: 76013-76163 bp Feature: domain Description: INT_ICEBs1_C_like Location: 76559-77078 bp Feature: domain Description: INT_ICEBs1_C_like Location: 76559-77078 bp Feature: gene Location: 77187-78005 bp Feature: domain Description: DDE_Tnp_1_3 Location: 77427-77871 bp Feature: domain Description: DDE_Tnp_1_3 Location: 7742 7-77871 bp Feature: gene Location: 78150-79643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78504-79188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78504-79188 bp Feature: domain Description: GIIM Note: maturase Location: 79260-79470 bp Feature: domain Description: GIIM Note: maturase Location: 792 60-79470 bp Feature: gene Location: 80418-81887 bp Feature: gene Location: 82586-84748 bp Feature: domain Description: Lhr Location: 82604-83843 bp Feature: domain Description: Lhr Location: 82 604-83843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), DDE_Tnp_1_3 (pfam13612), RVT-GII, GIIM (pfam08388), Lhr (COG1201)