myRT

myRT report for GCA_000787855.1_ASM78785v1

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Seq: BBPQ01000106.1 Streptacidiphilus anmyonensis DNA, contig: scaffold00106, whole genome shotgun sequence (19451 bp)
Overview 1 RT 1: 5569-19281 bp Neighborhood of RT #1 [5569, 19448] Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat Rhs_assc_core Endonuclea_NS_2 RVT-GII GIIM Tra5 Feature: gene Location: 5569-14925 bp Feature: domain Description: Laminin_G_3 Location: 6523-7036 bp Feature: domain Description: Laminin_G_3 Location: 6523-7036 bp Feature: domain Description: Laminin_G_3 Location: 7399-7891 bp Feature: domain Description: Laminin_G_3 Location: 7399-7891 bp Feature: domain Description: Laminin_G_3 Location: 8161-8644 bp Feature: domain Description: Laminin_G_3 Location: 81 61 -8644 bp Feature: domain Description: Laminin_G_3 Location: 8896-9397 bp Feature: domain Description: Laminin_G_3 Location: 8896-9397 bp Feature: domain Description: RHS_repeat Location: 9508-9601 bp Feature: domain Description: RHS_repeat Location: 9508-9601 bp Feature: domain Description: RHS_repeat Location: 9976-10060 bp Feature: domain Description: RHS_repeat Location: 9976-1 0060 bp Feature: domain Description: RHS_repeat Location: 10096-10165 bp Feature: domain Description: RHS_repeat Location: 1 0096-1 01 65 bp Feature: domain Description: RHS_repeat Location: 10297-10408 bp Feature: domain Description: RHS_repeat Location: 1 0297-1 0408 bp Feature: domain Description: RHS_repeat Location: 10528-10630 bp Feature: domain Description: RHS_repeat Location: 1 0528-1 0630 bp Feature: domain Description: RHS_repeat Location: 10684-10795 bp Feature: domain Description: RHS_repeat Location: 1 0684-1 0795 bp Feature: domain Description: RHS_repeat Location: 11266-11404 bp Feature: domain Description: RHS_repeat Location: 1 1 266-1 1 404 bp Feature: domain Description: RHS_repeat Location: 11506-11599 bp Feature: domain Description: RHS_repeat Location: 1 1 506-1 1 599 bp Feature: domain Description: RHS_repeat Location: 11713-11818 bp Feature: domain Description: RHS_repeat Location: 1 1 71 3-1 1 81 8 bp Feature: domain Description: RHS_repeat Location: 11839-11950 bp Feature: domain Description: RHS_repeat Location: 1 1 839-1 1 950 bp Feature: domain Description: RHS_repeat Location: 12004-12100 bp Feature: domain Description: RHS_repeat Location: 1 2004-1 21 00 bp Feature: domain Description: RHS_repeat Location: 12304-12424 bp Feature: domain Description: RHS_repeat Location: 1 2304-1 2424 bp Feature: domain Description: RHS_repeat Location: 12439-12547 bp Feature: domain Description: RHS_repeat Location: 1 2439-1 2547 bp Feature: domain Description: RHS_repeat Location: 12559-12667 bp Feature: domain Description: RHS_repeat Location: 1 2559-1 2667 bp Feature: domain Description: RHS_repeat Location: 12841-12928 bp Feature: domain Description: RHS_repeat Location: 1 2841 -1 2928 bp Feature: domain Description: RHS_repeat Location: 12997-13084 bp Feature: domain Description: RHS_repeat Location: 1 2997-1 3084 bp Feature: domain Description: Rhs_assc_core Location: 13351-13591 bp Feature: domain Description: Rhs_assc_core Location: 1 3351 -1 3591 bp Feature: domain Description: Endonuclea_NS_2 Location: 14560-14782 bp Feature: domain Description: Endonuclea_NS_2 Location: 1 4560-1 4782 bp Feature: gene Location: 15672-16034 bp Feature: gene Location: 16298-17764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16640-17336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6640-1 7336 bp Feature: domain Description: GIIM Note: maturase Location: 17408-17609 bp Feature: domain Description: GIIM Note: maturase Location: 1 7408-1 7609 bp Feature: gene Location: 18393-19448 bp Feature: domain Description: Tra5 Location: 18492-19281 bp Feature: domain Description: Tra5 Location: 1 8492-1 9281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801), Laminin_G_3 (pfam13385), RHS_repeat (pfam05593), Rhs_assc_core (TIGR03696), Endonuclea_NS_2 (pfam13930)

Seq: BBPQ01000031.1 Streptacidiphilus anmyonensis DNA, contig: scaffold00031, whole genome shotgun sequence (91431 bp)
Overview 1 RT 1: 83154-88473 bp Neighborhood of RT #1 [83154, 88473] DDE_3 RVT-GII GIIM Feature: gene Location: 83154-84125 bp Feature: gene Location: 84662-85012 bp Feature: domain Description: DDE_3 Location: 84671-84983 bp Feature: domain Description: DDE_3 Location: 84671-84983 bp Feature: gene Location: 85191-86639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85509-86196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85509-86196 bp Feature: domain Description: GIIM Note: maturase Location: 86271-86481 bp Feature: domain Description: GIIM Note: maturase Location: 862 71-86481 bp Feature: gene Location: 87429-87638 bp Feature: gene Location: 88204-88473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)