myRT

myRT report for GCA_000788315.1_ASM78831v1

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Seq: JSWN01000062.1 Vibrio vulnificus strain 99-796 DP-E7 contig00062, whole genome shotgun sequence (1941 bp)
Overview 1 RT 1: 83-1343 bp Neighborhood of RT #1 [83, 1444] RVT-GII GIIM Feature: gene Location: 83-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362-1055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362-1 055 bp Feature: domain Description: GIIM Note: maturase Location: 1139-1343 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 39-1 343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JSWN01000012.1 Vibrio vulnificus strain 99-796 DP-E7 contig00012, whole genome shotgun sequence (146861 bp)
Overview 1 RT 1: 117610-126681 bp Neighborhood of RT #1 [117610, 126863] N6_Mtase COG3950 TIGR02646 RVT-GII GIIM PLDc_N_DEXD_b3 SSL2 LexA Methyltransf_23 Feature: gene Location: 117610-120150 bp Feature: domain Description: N6_Mtase Location: 118021-118864 bp Feature: domain Description: N6_Mtase Location: 11802 1-118864 bp Feature: domain Description: COG3950 Location: 118873-120058 bp Feature: domain Description: COG3950 Location: 118873-12 0058 bp Feature: gene Location: 120134-120931 bp Feature: domain Description: TIGR02646 Location: 120269-120737 bp Feature: domain Description: TIGR02 646 Location: 12 02 69-12 0737 bp Feature: gene Location: 121881-123164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122094-122715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 094-12 2 715 bp Feature: domain Description: GIIM Note: maturase Location: 122766-122979 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 766-12 2 979 bp Feature: gene Location: 123355-126261 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 123412-123886 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 12 3412 -12 3886 bp Feature: domain Description: SSL2 Location: 123991-125074 bp Feature: domain Description: SSL2 Location: 12 3991-12 5074 bp Feature: domain Description: LexA Location: 125830-126250 bp Feature: domain Description: LexA Location: 12 5830-12 62 50 bp Feature: gene Location: 126276-126863 bp Feature: domain Description: Methyltransf_23 Location: 126339-126681 bp Feature: domain Description: Methyltransf_2 3 Location: 12 6339-12 6681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein), RVT-GII, GIIM (pfam08388), PLDc_N_DEXD_b3 (cd09205), SSL2 (COG1061), LexA (COG1974), Methyltransf_23 (pfam13489)