myRT

myRT report for GCA_000789495.1_AZPAE15035

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Seq: JTNL01000022.1 (282804 bp)
Overview 1 RT 1: 49311-58191 bp 2 RT 2: 74457-84751 bp Neighborhood of RT #1 [49311, 58199] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74457, 84762] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49311-49985 bp Feature: domain Description: NTP_transferase_like_1 Location: 49317-49956 bp Feature: domain Description: NTP_transferase_like_1 Location: 4931 7-49956 bp Feature: gene Location: 49982-50998 bp Feature: domain Description: COG3178 Location: 49985-50984 bp Feature: domain Description: COG31 78 Location: 49985-50984 bp Feature: gene Location: 52271-53983 bp Feature: RT Description: RVT_N Location: 52328-52571 bp Feature: RT Description: RVT_N Location: 52328-52571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52616-53252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5261 6-53252 bp Feature: domain Description: YkfC Location: 53459-53612 bp Feature: domain Description: YkfC Location: 53459-5361 2 bp Feature: domain Description: HNH Note: nucleases Location: 53789-53927 bp Feature: domain Description: HNH Note: nucleases Location: 53789-53927 bp Feature: gene Location: 54116-56926 bp Feature: domain Description: LptD Location: 54311-56912 bp Feature: domain Description: LptD Location: 5431 1 -5691 2 bp Feature: gene Location: 56985-58199 bp Feature: domain Description: PRK10770 Location: 56997-58191 bp Feature: domain Description: PRK1 0770 Location: 56997-581 91 bp Feature: gene Location: 74457-76310 bp Feature: domain Description: PRK05658 Location: 74469-76308 bp Feature: domain Description: PRK05658 Location: 74469-76308 bp Feature: gene Location: 76417-80154 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76525-77182 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76525-771 82 bp Feature: domain Description: PRK09776 Location: 77395-77866 bp Feature: domain Description: PRK09776 Location: 77395-77866 bp Feature: domain Description: PAS Location: 77911-78448 bp Feature: domain Description: PAS Location: 7791 1 -78448 bp Feature: domain Description: PRK10060 Location: 78457-80104 bp Feature: domain Description: PRK1 0060 Location: 78457-801 04 bp Feature: gene Location: 81235-82920 bp Feature: RT Description: RVT_N Location: 81292-81532 bp Feature: RT Description: RVT_N Location: 81 292-81 532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81580-82216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 580-8221 6 bp Feature: domain Description: GIIM Note: maturase Location: 82270-82501 bp Feature: domain Description: GIIM Note: maturase Location: 82270-82501 bp Feature: domain Description: HNH Note: nucleases Location: 82753-82891 bp Feature: domain Description: HNH Note: nucleases Location: 82753-82891 bp Feature: gene Location: 83641-84762 bp Feature: domain Description: COG3177 Location: 83659-84751 bp Feature: domain Description: COG31 77 Location: 83659-84751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )