myRT

myRT report for GCA_000789535.1_AZPAE14929

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Seq: JTRM01000003.1 (232786 bp)
Overview 1 RT 1: 138671-148977 bp Neighborhood of RT #1 [138671, 148979] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 138671-139792 bp Feature: domain Description: COG3177 Location: 138689-139781 bp Feature: domain Description: COG31 77 Location: 1 38689-1 39781 bp Feature: gene Location: 140051-140188 bp Feature: gene Location: 140516-142201 bp Feature: RT Description: RVT_N Location: 140573-140813 bp Feature: RT Description: RVT_N Location: 1 40573-1 4081 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140861-141497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 40861 -1 41 497 bp Feature: domain Description: GIIM Note: maturase Location: 141551-141782 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 551 -1 41 782 bp Feature: domain Description: HNH Note: nucleases Location: 142034-142172 bp Feature: domain Description: HNH Note: nucleases Location: 1 42034-1 421 72 bp Feature: gene Location: 143282-147019 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 143390-144047 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 1 43390-1 44047 bp Feature: domain Description: PRK09776 Location: 144260-144731 bp Feature: domain Description: PRK09776 Location: 1 44260-1 44731 bp Feature: domain Description: PAS Location: 144803-145313 bp Feature: domain Description: PAS Location: 1 44803-1 4531 3 bp Feature: domain Description: PRK10060 Location: 145322-146969 bp Feature: domain Description: PRK1 0060 Location: 1 45322-1 46969 bp Feature: gene Location: 147126-148979 bp Feature: domain Description: PRK05658 Location: 147138-148977 bp Feature: domain Description: PRK05658 Location: 1 471 38-1 48977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)