myRT

myRT report for GCA_000789555.1_AZPAE14840

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Seq: JTUU01000038.1 (81479 bp)
Overview 1 RT 1: 2-9679 bp Neighborhood of RT #1 [2, 9681] SH3_3 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 2-985 bp Feature: domain Description: SH3_3 Location: 764-911 bp Feature: domain Description: SH3_3 Location: 764-91 1 bp Feature: gene Location: 1218-2903 bp Feature: RT Description: RVT_N Location: 1275-1515 bp Feature: RT Description: RVT_N Location: 1 275-1 51 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1563-2199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 563-21 99 bp Feature: domain Description: GIIM Note: maturase Location: 2253-2484 bp Feature: domain Description: GIIM Note: maturase Location: 2253-2484 bp Feature: domain Description: HNH Note: nucleases Location: 2736-2874 bp Feature: domain Description: HNH Note: nucleases Location: 2736-2874 bp Feature: gene Location: 3984-7721 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 4092-4749 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 4092-4749 bp Feature: domain Description: PRK09776 Location: 4962-5433 bp Feature: domain Description: PRK09776 Location: 4962-5433 bp Feature: domain Description: PAS Location: 5478-6015 bp Feature: domain Description: PAS Location: 5478-601 5 bp Feature: domain Description: PRK10060 Location: 6024-7671 bp Feature: domain Description: PRK1 0060 Location: 6024-7671 bp Feature: gene Location: 7828-9681 bp Feature: domain Description: PRK05658 Location: 7840-9679 bp Feature: domain Description: PRK05658 Location: 7840-9679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), SH3_3 (pfam08239), PRK05658 (RNA polymerase sigma factor RpoD; Validated)