myRT

myRT report for GCA_000789685.1_AZPAE14844

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Seq: JTUQ01000032.1 (229851 bp)
Overview 1 RT 1: 51449-60302 bp 2 RT 2: 76567-86864 bp Neighborhood of RT #1 [51449, 60310] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [76567, 86875] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 51449-52123 bp Feature: domain Description: NTP_transferase_like_1 Location: 51455-52094 bp Feature: domain Description: NTP_transferase_like_1 Location: 51 455-52094 bp Feature: gene Location: 52120-53136 bp Feature: domain Description: COG3178 Location: 52123-53122 bp Feature: domain Description: COG31 78 Location: 521 23-531 22 bp Feature: gene Location: 54409-56121 bp Feature: RT Description: RVT_N Location: 54466-54709 bp Feature: RT Description: RVT_N Location: 54466-54709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54754-55390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54754-55390 bp Feature: domain Description: YkfC Location: 55597-55750 bp Feature: domain Description: YkfC Location: 55597-55750 bp Feature: domain Description: HNH Note: nucleases Location: 55927-56065 bp Feature: domain Description: HNH Note: nucleases Location: 55927-56065 bp Feature: gene Location: 56254-59037 bp Feature: domain Description: LptD Location: 56449-59023 bp Feature: domain Description: LptD Location: 56449-59023 bp Feature: gene Location: 59096-60310 bp Feature: domain Description: PRK10770 Location: 59108-60302 bp Feature: domain Description: PRK1 0770 Location: 591 08-60302 bp Feature: gene Location: 76567-78420 bp Feature: domain Description: PRK05658 Location: 76579-78418 bp Feature: domain Description: PRK05658 Location: 76579-7841 8 bp Feature: gene Location: 78527-82264 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 78635-79292 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 78635-79292 bp Feature: domain Description: PRK09776 Location: 79505-79976 bp Feature: domain Description: PRK09776 Location: 79505-79976 bp Feature: domain Description: PAS Location: 80033-80558 bp Feature: domain Description: PAS Location: 80033-80558 bp Feature: domain Description: PRK10060 Location: 80567-82214 bp Feature: domain Description: PRK1 0060 Location: 80567-8221 4 bp Feature: gene Location: 83345-85030 bp Feature: RT Description: RVT_N Location: 83402-83642 bp Feature: RT Description: RVT_N Location: 83402-83642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83690-84326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83690-84326 bp Feature: domain Description: GIIM Note: maturase Location: 84380-84611 bp Feature: domain Description: GIIM Note: maturase Location: 84380-8461 1 bp Feature: domain Description: HNH Note: nucleases Location: 84863-85001 bp Feature: domain Description: HNH Note: nucleases Location: 84863-85001 bp Feature: gene Location: 85358-85495 bp Feature: gene Location: 85754-86875 bp Feature: domain Description: COG3177 Location: 85772-86864 bp Feature: domain Description: COG31 77 Location: 85772-86864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )