myRT

myRT report for GCA_000789705.1_AZPAE14845

Download annotations/find similar RTs

Seq: JTUP01000009.1 (120270 bp)
Overview 1 RT 1: 52150-62820 bp Neighborhood of RT #1 [52150, 62885] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 52150-54003 bp Feature: domain Description: PRK05658 Location: 52162-54001 bp Feature: domain Description: PRK05658 Location: 521 62-54001 bp Feature: gene Location: 54110-57847 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 54218-54875 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 5421 8-54875 bp Feature: domain Description: PRK09776 Location: 55088-55559 bp Feature: domain Description: PRK09776 Location: 55088-55559 bp Feature: domain Description: PAS Location: 55604-56141 bp Feature: domain Description: PAS Location: 55604-561 41 bp Feature: domain Description: PRK10060 Location: 56150-57797 bp Feature: domain Description: PRK1 0060 Location: 561 50-57797 bp Feature: gene Location: 58928-60613 bp Feature: RT Description: RVT_N Location: 58985-59225 bp Feature: RT Description: RVT_N Location: 58985-59225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59273-59909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59273-59909 bp Feature: domain Description: GIIM Note: maturase Location: 59963-60194 bp Feature: domain Description: GIIM Note: maturase Location: 59963-601 94 bp Feature: domain Description: HNH Note: nucleases Location: 60446-60584 bp Feature: domain Description: HNH Note: nucleases Location: 60446-60584 bp Feature: gene Location: 61336-62457 bp Feature: domain Description: COG3177 Location: 61354-62446 bp Feature: domain Description: COG31 77 Location: 61 354-62446 bp Feature: gene Location: 62550-62885 bp Feature: domain Description: NERD Location: 62649-62820 bp Feature: domain Description: NERD Location: 62649-62820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )
NERD (pfam08378)