myRT

myRT report for GCA_000789745.1_AZPAE14846

Download annotations/find similar RTs

Seq: JTUO01000080.1 (35482 bp)
Overview 1 RT 1: 25772-33943 bp Neighborhood of RT #1 [25772, 34137] DUF262 YeeA RVT-UG5 AAA_21 AAA_21 Feature: gene Location: 25772-27643 bp Feature: domain Description: DUF262 Location: 25820-26588 bp Feature: domain Description: DUF262 Location: 25820-26588 bp Feature: gene Location: 27647-28756 bp Feature: domain Description: YeeA Location: 27842-28622 bp Feature: domain Description: YeeA Location: 27842-28622 bp Feature: gene Location: 29424-32444 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 29919-30390 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2991 9-30390 bp Feature: gene Location: 32441-32998 bp Feature: gene Location: 32998-34137 bp Feature: domain Description: AAA_21 Location: 33070-33139 bp Feature: domain Description: AAA_21 Location: 33070-331 39 bp Feature: domain Description: AAA_21 Location: 33613-33943 bp Feature: domain Description: AAA_21 Location: 3361 3-33943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), YeeA (COG1002), RVT-UG5, AAA_21 (pfam13304)

Seq: JTUO01000001.1 (55886 bp)
Overview 1 RT 1: 34957-39253 bp Neighborhood of RT #1 [34957, 39336] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 34957-35136 bp Feature: gene Location: 35320-35718 bp Feature: gene Location: 35868-37136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36081-36738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36081-36738 bp Feature: domain Description: GIIM Note: maturase Location: 36816-37038 bp Feature: domain Description: GIIM Note: maturase Location: 36816-37038 bp Feature: gene Location: 37525-38166 bp Feature: domain Description: DUF772 Location: 37675-37870 bp Feature: domain Description: DUF772 Location: 37675-37870 bp Feature: gene Location: 38509-39336 bp Feature: domain Description: ABC_phnC Location: 38539-39253 bp Feature: domain Description: ABC_phnC Location: 38539-392 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: JTUO01000043.1 (96639 bp)
Overview 1 RT 1: 12489-22249 bp 2 RT 2: 38506-46670 bp Neighborhood of RT #1 [12489, 22251] int int RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [38506, 46684] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 Feature: gene Location: 12489-13244 bp Feature: domain Description: int Location: 12492-13131 bp Feature: domain Description: int Location: 12492-13 13 1 bp Feature: gene Location: 13160-13657 bp Feature: domain Description: int Location: 13169-13508 bp Feature: domain Description: int Location: 13 169-13 508 bp Feature: gene Location: 13788-15473 bp Feature: domain Description: RVT_N Location: 13845-14085 bp Feature: domain Description: RVT_N Location: 13 845-14085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14133-14769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413 3 -14769 bp Feature: domain Description: GIIM Note: maturase Location: 14823-15054 bp Feature: domain Description: GIIM Note: maturase Location: 14823 -15054 bp Feature: domain Description: HNH Note: nucleases Location: 15306-15444 bp Feature: domain Description: HNH Note: nucleases Location: 153 06-15444 bp Feature: gene Location: 16554-20291 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 16662-17319 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 16662-173 19 bp Feature: domain Description: PRK09776 Location: 17532-18003 bp Feature: domain Description: PRK09776 Location: 1753 2-18003 bp Feature: domain Description: PAS Location: 18048-18585 bp Feature: domain Description: PAS Location: 18048-18585 bp Feature: domain Description: PRK10060 Location: 18597-20241 bp Feature: domain Description: PRK10060 Location: 18597-20241 bp Feature: gene Location: 20398-22251 bp Feature: domain Description: PRK05658 Location: 20410-22249 bp Feature: domain Description: PRK05658 Location: 20410-22249 bp Feature: gene Location: 38506-39720 bp Feature: domain Description: PRK10770 Location: 38518-39712 bp Feature: domain Description: PRK10770 Location: 3 8518-3 9712 bp Feature: gene Location: 39779-42550 bp Feature: domain Description: LptD Location: 39974-42536 bp Feature: domain Description: LptD Location: 3 9974-4253 6 bp Feature: gene Location: 42683-44395 bp Feature: domain Description: RVT_N Location: 42740-42983 bp Feature: domain Description: RVT_N Location: 42740-42983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43028-43664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 028-43 664 bp Feature: domain Description: YkfC Location: 43874-44024 bp Feature: domain Description: YkfC Location: 43 874-44024 bp Feature: domain Description: HNH Note: nucleases Location: 44201-44339 bp Feature: domain Description: HNH Note: nucleases Location: 44201-443 3 9 bp Feature: gene Location: 45237-45371 bp Feature: gene Location: 45668-46684 bp Feature: domain Description: COG3178 Location: 45671-46670 bp Feature: domain Description: COG3 178 Location: 45671-46670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)
PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family )