myRT

myRT report for GCA_000789835.1_AZPAE14851

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Seq: JTUK01000041.1 (78625 bp)
Overview 1 RT 1: 26967-31263 bp Neighborhood of RT #1 [26967, 31346] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 26967-27146 bp Feature: gene Location: 27330-27728 bp Feature: gene Location: 27878-29146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28091-28748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28091 -28748 bp Feature: domain Description: GIIM Note: maturase Location: 28826-29048 bp Feature: domain Description: GIIM Note: maturase Location: 28826-29048 bp Feature: gene Location: 29535-30176 bp Feature: domain Description: DUF772 Location: 29685-29880 bp Feature: domain Description: DUF772 Location: 29685-29880 bp Feature: gene Location: 30519-31346 bp Feature: domain Description: ABC_phnC Location: 30549-31263 bp Feature: domain Description: ABC_phnC Location: 30549-31 263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: JTUK01000016.1 (68116 bp)
Overview 1 RT 1: 34520-37179 bp Neighborhood of RT #1 [34520, 37205] RVT-UG17 HipB Feature: gene Location: 34520-35884 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 34748-35351 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 34748-35351 bp Feature: gene Location: 36413-36838 bp Feature: gene Location: 36924-37205 bp Feature: domain Description: HipB Location: 36945-37179 bp Feature: domain Description: HipB Location: 36945-37179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, HipB (COG1396)

Seq: JTUK01000015.1 (196787 bp)
Overview 1 RT 1: 49683-58541 bp Neighborhood of RT #1 [49683, 58549] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49683-50357 bp Feature: domain Description: NTP_transferase_like_1 Location: 49689-50328 bp Feature: domain Description: NTP_transferase_like_1 Location: 49689-503 28 bp Feature: gene Location: 50354-51370 bp Feature: domain Description: COG3178 Location: 50357-51356 bp Feature: domain Description: COG3 178 Location: 503 57-513 56 bp Feature: gene Location: 52642-54354 bp Feature: domain Description: RVT_N Location: 52699-52942 bp Feature: domain Description: RVT_N Location: 52699-52942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52987-53623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52987-53 623 bp Feature: domain Description: YkfC Location: 53833-53983 bp Feature: domain Description: YkfC Location: 53 83 3 -53 983 bp Feature: domain Description: HNH Note: nucleases Location: 54160-54298 bp Feature: domain Description: HNH Note: nucleases Location: 54160-54298 bp Feature: gene Location: 54487-57276 bp Feature: domain Description: LptD Location: 54682-57262 bp Feature: domain Description: LptD Location: 54682-57262 bp Feature: gene Location: 57335-58549 bp Feature: domain Description: PRK10770 Location: 57347-58541 bp Feature: domain Description: PRK10770 Location: 573 47-58541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)