myRT

myRT report for GCA_000789845.1_AZPAE14852

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Seq: JTUJ01000033.1 (117587 bp)
Overview 1 RT 1: 35809-46115 bp Neighborhood of RT #1 [35809, 46117] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 35809-36930 bp Feature: domain Description: COG3177 Location: 35827-36919 bp Feature: domain Description: COG31 77 Location: 35827-3691 9 bp Feature: gene Location: 37189-37326 bp Feature: gene Location: 37654-39339 bp Feature: RT Description: RVT_N Location: 37711-37951 bp Feature: RT Description: RVT_N Location: 3771 1 -37951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37999-38635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37999-38635 bp Feature: domain Description: GIIM Note: maturase Location: 38689-38920 bp Feature: domain Description: GIIM Note: maturase Location: 38689-38920 bp Feature: domain Description: HNH Note: nucleases Location: 39172-39310 bp Feature: domain Description: HNH Note: nucleases Location: 391 72-3931 0 bp Feature: gene Location: 40420-44157 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 40528-41185 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 40528-41 1 85 bp Feature: domain Description: PRK09776 Location: 41398-41869 bp Feature: domain Description: PRK09776 Location: 41 398-41 869 bp Feature: domain Description: PAS Location: 41914-42451 bp Feature: domain Description: PAS Location: 41 91 4-42451 bp Feature: domain Description: PRK10060 Location: 42460-44107 bp Feature: domain Description: PRK1 0060 Location: 42460-441 07 bp Feature: gene Location: 44264-46117 bp Feature: domain Description: PRK05658 Location: 44276-46115 bp Feature: domain Description: PRK05658 Location: 44276-461 1 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)