myRT

myRT report for GCA_000790265.1_AZPAE14869

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Seq: JTTT01000020.1 (225179 bp)
Overview 1 RT 1: 71534-81833 bp Neighborhood of RT #1 [71534, 81844] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 71534-73387 bp Feature: domain Description: PRK05658 Location: 71546-73385 bp Feature: domain Description: PRK05658 Location: 71 546-73385 bp Feature: gene Location: 73494-77231 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73602-74259 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73602-74259 bp Feature: domain Description: PRK09776 Location: 74472-74943 bp Feature: domain Description: PRK09776 Location: 74472-74943 bp Feature: domain Description: PAS Location: 75000-75525 bp Feature: domain Description: PAS Location: 75000-75525 bp Feature: domain Description: PRK10060 Location: 75534-77181 bp Feature: domain Description: PRK1 0060 Location: 75534-771 81 bp Feature: gene Location: 78312-79997 bp Feature: RT Description: RVT_N Location: 78369-78609 bp Feature: RT Description: RVT_N Location: 78369-78609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78657-79293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78657-79293 bp Feature: domain Description: GIIM Note: maturase Location: 79347-79578 bp Feature: domain Description: GIIM Note: maturase Location: 79347-79578 bp Feature: domain Description: HNH Note: nucleases Location: 79830-79968 bp Feature: domain Description: HNH Note: nucleases Location: 79830-79968 bp Feature: gene Location: 80300-80461 bp Feature: gene Location: 80723-81844 bp Feature: domain Description: COG3177 Location: 80741-81833 bp Feature: domain Description: COG31 77 Location: 80741 -81 833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )

Seq: JTTT01000039.1 (218155 bp)
Overview 1 RT 1: 97613-103709 bp Neighborhood of RT #1 [97613, 103735] PRK05347 RVT_N RVT-GII YkfC HNH PRK10791 lipid_A_lpxH Feature: gene Location: 97613-99298 bp Feature: domain Description: PRK05347 Location: 97643-99290 bp Feature: domain Description: PRK05347 Location: 97643-992 90 bp Feature: gene Location: 100405-100536 bp Feature: gene Location: 100673-102388 bp Feature: RT Description: RVT_N Location: 100727-100970 bp Feature: RT Description: RVT_N Location: 10072 7-100970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101015-101651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101015-101651 bp Feature: domain Description: YkfC Location: 101876-102053 bp Feature: domain Description: YkfC Location: 101876-102 053 bp Feature: domain Description: HNH Note: nucleases Location: 102200-102338 bp Feature: domain Description: HNH Note: nucleases Location: 102 2 00-102 338 bp Feature: gene Location: 102511-103008 bp Feature: domain Description: PRK10791 Location: 102514-103000 bp Feature: domain Description: PRK10791 Location: 102 514-103000 bp Feature: gene Location: 103013-103735 bp Feature: domain Description: lipid_A_lpxH Location: 103025-103709 bp Feature: domain Description: lipid_A_lpxH Location: 10302 5-103709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), PRK10791 (peptidylprolyl isomerase B), lipid_A_lpxH (TIGR01854), PRK05347 (glutaminyl-tRNA synthetase; Provisional)