myRT

myRT report for GCA_000790585.1_AZPAE15024

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Seq: JTNW01000027.1 (126972 bp)
Overview 1 RT 1: 83834-94504 bp Neighborhood of RT #1 [83834, 94569] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 83834-85687 bp Feature: domain Description: PRK05658 Location: 83846-85685 bp Feature: domain Description: PRK05658 Location: 83846-85685 bp Feature: gene Location: 85794-89531 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85902-86559 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85902-86559 bp Feature: domain Description: PRK09776 Location: 86772-87243 bp Feature: domain Description: PRK09776 Location: 86772-87243 bp Feature: domain Description: PAS Location: 87288-87825 bp Feature: domain Description: PAS Location: 87288-87825 bp Feature: domain Description: PRK10060 Location: 87834-89481 bp Feature: domain Description: PRK1 0060 Location: 87834-89481 bp Feature: gene Location: 90612-92297 bp Feature: RT Description: RVT_N Location: 90669-90909 bp Feature: RT Description: RVT_N Location: 90669-90909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90957-91593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90957-91 593 bp Feature: domain Description: GIIM Note: maturase Location: 91647-91878 bp Feature: domain Description: GIIM Note: maturase Location: 91 647-91 878 bp Feature: domain Description: HNH Note: nucleases Location: 92130-92268 bp Feature: domain Description: HNH Note: nucleases Location: 921 30-92268 bp Feature: gene Location: 93020-94141 bp Feature: domain Description: COG3177 Location: 93038-94130 bp Feature: domain Description: COG31 77 Location: 93038-941 30 bp Feature: gene Location: 94234-94569 bp Feature: domain Description: NERD Location: 94333-94504 bp Feature: domain Description: NERD Location: 94333-94504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )
NERD (pfam08378)