myRT

myRT report for GCA_000790905.1_AZPAE14893

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Seq: JTSV01000023.1 (204901 bp)
Overview 1 RT 1: 159639-168477 bp Neighborhood of RT #1 [159639, 168506] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 159639-160853 bp Feature: domain Description: PRK10770 Location: 159651-160845 bp Feature: domain Description: PRK1 0770 Location: 1 59651 -1 60845 bp Feature: gene Location: 160912-163701 bp Feature: domain Description: LptD Location: 161107-163687 bp Feature: domain Description: LptD Location: 1 61 1 07-1 63687 bp Feature: gene Location: 163834-165546 bp Feature: domain Description: RVT_N Location: 163891-164134 bp Feature: domain Description: RVT_N Location: 1 63891 -1 641 34 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164179-164815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 641 79-1 6481 5 bp Feature: domain Description: YkfC Location: 165025-165175 bp Feature: domain Description: YkfC Location: 1 65025-1 651 75 bp Feature: domain Description: HNH Note: nucleases Location: 165352-165490 bp Feature: domain Description: HNH Note: nucleases Location: 1 65352-1 65490 bp Feature: gene Location: 166819-167835 bp Feature: domain Description: COG3178 Location: 166822-167821 bp Feature: domain Description: COG31 78 Location: 1 66822-1 67821 bp Feature: gene Location: 167832-168506 bp Feature: domain Description: NTP_transferase_like_1 Location: 167838-168477 bp Feature: domain Description: NTP_transferase_like_1 Location: 1 67838-1 68477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: JTSV01000039.1 (84490 bp)
Overview 1 RT 1: 32977-36706 bp Neighborhood of RT #1 [32977, 36706] SLATT_5 RVT-UG17 Feature: gene Location: 32977-33111 bp Feature: gene Location: 34095-34391 bp Feature: domain Description: SLATT_5 Location: 34104-34365 bp Feature: domain Description: SLATT_5 Location: 34104-34365 bp Feature: gene Location: 34388-35752 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 34616-35219 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 34616-352 19 bp Feature: gene Location: 35794-36264 bp Feature: gene Location: 36281-36706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: JTSV01000056.1 (37140 bp)
Overview 1 RT 1: 2-2923 bp Neighborhood of RT #1 [2, 2923] RVT-GII GIIM Feature: gene Location: 2-208 bp Feature: gene Location: 744-2012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 957-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1914 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1914 bp Feature: gene Location: 2162-2560 bp Feature: gene Location: 2744-2923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)