myRT

myRT report for GCA_000791035.1_AZPAE14898

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Seq: JTSR01000009.1 (237965 bp)
Overview 1 RT 1: 83708-94378 bp Neighborhood of RT #1 [83708, 94443] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 83708-85561 bp Feature: domain Description: PRK05658 Location: 83720-85559 bp Feature: domain Description: PRK05658 Location: 83720-85559 bp Feature: gene Location: 85668-89405 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85776-86433 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85776-86433 bp Feature: domain Description: PRK09776 Location: 86646-87117 bp Feature: domain Description: PRK09776 Location: 86646-871 1 7 bp Feature: domain Description: PAS Location: 87162-87699 bp Feature: domain Description: PAS Location: 871 62-87699 bp Feature: domain Description: PRK10060 Location: 87708-89355 bp Feature: domain Description: PRK1 0060 Location: 87708-89355 bp Feature: gene Location: 90486-92171 bp Feature: RT Description: RVT_N Location: 90543-90783 bp Feature: RT Description: RVT_N Location: 90543-90783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90831-91467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90831 -91 467 bp Feature: domain Description: GIIM Note: maturase Location: 91521-91752 bp Feature: domain Description: GIIM Note: maturase Location: 91 521 -91 752 bp Feature: domain Description: HNH Note: nucleases Location: 92004-92142 bp Feature: domain Description: HNH Note: nucleases Location: 92004-921 42 bp Feature: gene Location: 92894-94015 bp Feature: domain Description: COG3177 Location: 92912-94004 bp Feature: domain Description: COG31 77 Location: 9291 2-94004 bp Feature: gene Location: 94108-94443 bp Feature: domain Description: NERD Location: 94207-94378 bp Feature: domain Description: NERD Location: 94207-94378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )
NERD (pfam08378)