myRT

myRT report for GCA_000791105.1_AZPAE14901

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Seq: JTSO01000045.1 (70950 bp)
Overview 1 RT 1: 61980-70817 bp Neighborhood of RT #1 [61980, 70825] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 61980-62654 bp Feature: domain Description: NTP_transferase_like_1 Location: 61986-62625 bp Feature: domain Description: NTP_transferase_like_1 Location: 61 986-62625 bp Feature: gene Location: 62651-63667 bp Feature: domain Description: COG3178 Location: 62654-63653 bp Feature: domain Description: COG31 78 Location: 62654-63653 bp Feature: gene Location: 64939-66651 bp Feature: RT Description: RVT_N Location: 64996-65239 bp Feature: RT Description: RVT_N Location: 64996-65239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65284-65917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65284-6591 7 bp Feature: domain Description: YkfC Location: 66130-66280 bp Feature: domain Description: YkfC Location: 661 30-66280 bp Feature: domain Description: HNH Note: nucleases Location: 66457-66595 bp Feature: domain Description: HNH Note: nucleases Location: 66457-66595 bp Feature: gene Location: 66784-69552 bp Feature: domain Description: LptD Location: 67129-69538 bp Feature: domain Description: LptD Location: 671 29-69538 bp Feature: gene Location: 69611-70825 bp Feature: domain Description: PRK10770 Location: 69623-70817 bp Feature: domain Description: PRK1 0770 Location: 69623-7081 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: JTSO01000013.1 (224671 bp)
Overview 1 RT 1: 16119-26417 bp Neighborhood of RT #1 [16119, 26428] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 16119-17972 bp Feature: domain Description: PRK05658 Location: 16131-17970 bp Feature: domain Description: PRK05658 Location: 16131-17970 bp Feature: gene Location: 18079-21816 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 18187-18844 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 18187-18844 bp Feature: domain Description: PRK09776 Location: 19057-19531 bp Feature: domain Description: PRK09776 Location: 19057-19531 bp Feature: domain Description: PAS Location: 19576-20116 bp Feature: domain Description: PAS Location: 19576-2 0116 bp Feature: domain Description: PRK10060 Location: 20119-21766 bp Feature: domain Description: PRK10060 Location: 2 0119-2 1766 bp Feature: gene Location: 22897-24582 bp Feature: RT Description: RVT_N Location: 22954-23194 bp Feature: RT Description: RVT_N Location: 2 2 954-2 3194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23242-23878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 42 -2 3878 bp Feature: domain Description: GIIM Note: maturase Location: 23932-24163 bp Feature: domain Description: GIIM Note: maturase Location: 2 3932 -2 4163 bp Feature: domain Description: HNH Note: nucleases Location: 24415-24553 bp Feature: domain Description: HNH Note: nucleases Location: 2 4415-2 4553 bp Feature: gene Location: 24885-25046 bp Feature: gene Location: 25307-26428 bp Feature: domain Description: COG3177 Location: 25325-26417 bp Feature: domain Description: COG3177 Location: 2 532 5-2 6417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )