myRT

myRT report for GCA_000791905.1_AZPAE14965

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Seq: JTQC01000032.1 (86023 bp)
Overview 1 RT 1: 35918-38577 bp Neighborhood of RT #1 [35918, 38603] RVT-UG17 HipB Feature: gene Location: 35918-37282 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 36146-36749 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 361 46-36749 bp Feature: gene Location: 37811-38236 bp Feature: gene Location: 38322-38603 bp Feature: domain Description: HipB Location: 38343-38577 bp Feature: domain Description: HipB Location: 38343-38577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, HipB (COG1396)

Seq: JTQC01000013.1 (282033 bp)
Overview 1 RT 1: 49430-58288 bp 2 RT 2: 74557-84854 bp Neighborhood of RT #1 [49430, 58296] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74557, 84865] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49430-50104 bp Feature: domain Description: NTP_transferase_like_1 Location: 49436-50075 bp Feature: domain Description: NTP_transferase_like_1 Location: 49436-50075 bp Feature: gene Location: 50101-51117 bp Feature: domain Description: COG3178 Location: 50104-51103 bp Feature: domain Description: COG3178 Location: 50104-51103 bp Feature: gene Location: 52389-54101 bp Feature: domain Description: RVT_N Location: 52446-52689 bp Feature: domain Description: RVT_N Location: 52 446-52 689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52734-53370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 734-53370 bp Feature: domain Description: YkfC Location: 53580-53730 bp Feature: domain Description: YkfC Location: 53580-53730 bp Feature: domain Description: HNH Note: nucleases Location: 53907-54045 bp Feature: domain Description: HNH Note: nucleases Location: 53907-54045 bp Feature: gene Location: 54234-57023 bp Feature: domain Description: LptD Location: 54429-57009 bp Feature: domain Description: LptD Location: 5442 9-57009 bp Feature: gene Location: 57082-58296 bp Feature: domain Description: PRK10770 Location: 57094-58288 bp Feature: domain Description: PRK10770 Location: 57094-582 88 bp Feature: gene Location: 74557-76410 bp Feature: domain Description: PRK05658 Location: 74569-76408 bp Feature: domain Description: PRK05658 Location: 74569-76408 bp Feature: gene Location: 76517-80254 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76625-77282 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 7662 5-772 82 bp Feature: domain Description: PRK09776 Location: 77495-77966 bp Feature: domain Description: PRK09776 Location: 77495-77966 bp Feature: domain Description: PAS Location: 78056-78548 bp Feature: domain Description: PAS Location: 78056-78548 bp Feature: domain Description: PRK10060 Location: 78557-80204 bp Feature: domain Description: PRK10060 Location: 78557-802 04 bp Feature: gene Location: 81335-83020 bp Feature: domain Description: RVT_N Location: 81392-81632 bp Feature: domain Description: RVT_N Location: 81392 -81632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81680-82316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81680-82 316 bp Feature: domain Description: GIIM Note: maturase Location: 82370-82601 bp Feature: domain Description: GIIM Note: maturase Location: 82 370-82 601 bp Feature: domain Description: HNH Note: nucleases Location: 82853-82991 bp Feature: domain Description: HNH Note: nucleases Location: 82 853-82 991 bp Feature: gene Location: 83348-83485 bp Feature: gene Location: 83744-84865 bp Feature: domain Description: COG3177 Location: 83762-84854 bp Feature: domain Description: COG3177 Location: 83762 -84854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )

Seq: JTQC01000026.1 (36900 bp)
Overview 1 RT 1: 3-2924 bp Neighborhood of RT #1 [3, 2924] RVT-GII GIIM Feature: gene Location: 3-209 bp Feature: gene Location: 745-2013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1693-1915 bp Feature: domain Description: GIIM Note: maturase Location: 1693 -1915 bp Feature: gene Location: 2163-2561 bp Feature: gene Location: 2745-2924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)