myRT

myRT report for GCA_000791915.1_AZPAE14968

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Seq: JTQA01000006.1 (275921 bp)
Overview 1 RT 1: 71560-82231 bp Neighborhood of RT #1 [71560, 82296] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 71560-73413 bp Feature: domain Description: PRK05658 Location: 71572-73411 bp Feature: domain Description: PRK05658 Location: 71 572-7341 1 bp Feature: gene Location: 73520-77257 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73628-74285 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73628-74285 bp Feature: domain Description: PRK09776 Location: 74498-74969 bp Feature: domain Description: PRK09776 Location: 74498-74969 bp Feature: domain Description: PAS Location: 75029-75551 bp Feature: domain Description: PAS Location: 75029-75551 bp Feature: domain Description: PRK10060 Location: 75560-77207 bp Feature: domain Description: PRK1 0060 Location: 75560-77207 bp Feature: gene Location: 78338-80023 bp Feature: RT Description: RVT_N Location: 78395-78635 bp Feature: RT Description: RVT_N Location: 78395-78635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78683-79319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78683-7931 9 bp Feature: domain Description: GIIM Note: maturase Location: 79373-79604 bp Feature: domain Description: GIIM Note: maturase Location: 79373-79604 bp Feature: domain Description: HNH Note: nucleases Location: 79856-79994 bp Feature: domain Description: HNH Note: nucleases Location: 79856-79994 bp Feature: gene Location: 80747-81868 bp Feature: domain Description: COG3177 Location: 80765-81857 bp Feature: domain Description: COG31 77 Location: 80765-81 857 bp Feature: gene Location: 81961-82296 bp Feature: domain Description: NERD Location: 82060-82231 bp Feature: domain Description: NERD Location: 82060-82231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )
NERD (pfam08378)

Seq: JTQA01000008.1 (2501 bp)
Overview 1 RT 1: 145-2498 bp Neighborhood of RT #1 [145, 2498] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 145-1863 bp Feature: RT Description: RVT_N Location: 202-439 bp Feature: RT Description: RVT_N Location: 2 02 -439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 490-1141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 490-1141 bp Feature: domain Description: GIIM Note: maturase Location: 1195-1426 bp Feature: domain Description: GIIM Note: maturase Location: 1195-142 6 bp Feature: domain Description: HNHc Note: nucleases Location: 1660-1816 bp Feature: domain Description: HNHc Note: nucleases Location: 1660-1816 bp Feature: gene Location: 2133-2261 bp Feature: gene Location: 2292-2498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)