myRT

myRT report for GCA_000792115.1_AZPAE14976

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Seq: JTPS01000007.1 (334297 bp)
Overview 1 RT 1: 222491-232497 bp Neighborhood of RT #1 [222491, 232499] HTH_XRE int RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 222491-222730 bp Feature: domain Description: HTH_XRE Location: 222503-222647 bp Feature: domain Description: HTH_XRE Location: 222503-222647 bp Feature: gene Location: 222735-223919 bp Feature: domain Description: int Location: 222738-223755 bp Feature: domain Description: int Location: 222738-223755 bp Feature: gene Location: 224036-225721 bp Feature: RT Description: RVT_N Location: 224093-224333 bp Feature: RT Description: RVT_N Location: 224093-224333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224381-225017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224381 -22501 7 bp Feature: domain Description: GIIM Note: maturase Location: 225071-225302 bp Feature: domain Description: GIIM Note: maturase Location: 225071 -225302 bp Feature: domain Description: HNH Note: nucleases Location: 225554-225692 bp Feature: domain Description: HNH Note: nucleases Location: 225554-225692 bp Feature: gene Location: 226802-230539 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 226910-227567 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 22691 0-227567 bp Feature: domain Description: PRK09776 Location: 227780-228251 bp Feature: domain Description: PRK09776 Location: 227780-228251 bp Feature: domain Description: PAS Location: 228296-228833 bp Feature: domain Description: PAS Location: 228296-228833 bp Feature: domain Description: PRK10060 Location: 228842-230489 bp Feature: domain Description: PRK1 0060 Location: 228842-230489 bp Feature: gene Location: 230646-232499 bp Feature: domain Description: PRK05658 Location: 230658-232497 bp Feature: domain Description: PRK05658 Location: 230658-232497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), int (PHA02601), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)
PRK05658 (RNA polymerase sigma factor RpoD; Validated)