myRT

myRT report for GCA_000792225.1_AZPAE14980

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Seq: JTPO01000023.1 (37911 bp)
Overview 1 RT 1: 3-2924 bp Neighborhood of RT #1 [3, 2924] RVT-GII GIIM Feature: gene Location: 3-209 bp Feature: gene Location: 745-2013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958-1 61 5 bp Feature: domain Description: GIIM Note: maturase Location: 1693-1915 bp Feature: domain Description: GIIM Note: maturase Location: 1 693-1 91 5 bp Feature: gene Location: 2163-2561 bp Feature: gene Location: 2745-2924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JTPO01000002.1 (143463 bp)
Overview 1 RT 1: 51360-60213 bp 2 RT 2: 76478-86775 bp Neighborhood of RT #1 [51360, 60221] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [76478, 86786] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 51360-52034 bp Feature: domain Description: NTP_transferase_like_1 Location: 51366-52005 bp Feature: domain Description: NTP_transferase_like_1 Location: 51366-52 005 bp Feature: gene Location: 52031-53047 bp Feature: domain Description: COG3178 Location: 52034-53033 bp Feature: domain Description: COG3178 Location: 52 034-53033 bp Feature: gene Location: 54320-56032 bp Feature: RT Description: RVT_N Location: 54377-54620 bp Feature: RT Description: RVT_N Location: 54377-5462 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54665-55301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54665-55301 bp Feature: domain Description: YkfC Location: 55508-55661 bp Feature: domain Description: YkfC Location: 55508-55661 bp Feature: domain Description: HNH Note: nucleases Location: 55838-55976 bp Feature: domain Description: HNH Note: nucleases Location: 55838-55976 bp Feature: gene Location: 56165-58948 bp Feature: domain Description: LptD Location: 56360-58934 bp Feature: domain Description: LptD Location: 56360-58934 bp Feature: gene Location: 59007-60221 bp Feature: domain Description: PRK10770 Location: 59019-60213 bp Feature: domain Description: PRK10770 Location: 59019-602 13 bp Feature: gene Location: 76478-78331 bp Feature: domain Description: PRK05658 Location: 76490-78329 bp Feature: domain Description: PRK05658 Location: 76490-7832 9 bp Feature: gene Location: 78438-82175 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 78546-79203 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 78546-792 03 bp Feature: domain Description: PRK09776 Location: 79416-79887 bp Feature: domain Description: PRK09776 Location: 79416-79887 bp Feature: domain Description: PAS Location: 79944-80469 bp Feature: domain Description: PAS Location: 79944-80469 bp Feature: domain Description: PRK10060 Location: 80478-82125 bp Feature: domain Description: PRK10060 Location: 80478-82 12 5 bp Feature: gene Location: 83256-84941 bp Feature: RT Description: RVT_N Location: 83313-83553 bp Feature: RT Description: RVT_N Location: 83313-83553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83601-84237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83601-842 37 bp Feature: domain Description: GIIM Note: maturase Location: 84291-84522 bp Feature: domain Description: GIIM Note: maturase Location: 842 91-8452 2 bp Feature: domain Description: HNH Note: nucleases Location: 84774-84912 bp Feature: domain Description: HNH Note: nucleases Location: 84774-84912 bp Feature: gene Location: 85269-85406 bp Feature: gene Location: 85665-86786 bp Feature: domain Description: COG3177 Location: 85683-86775 bp Feature: domain Description: COG3177 Location: 85683-86775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )